RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PRKACGP22612 351 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 IGFBP5P24593 272 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ACSM2AQ08AH3 577 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LRRC74AQ0VAA2 488 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 TMEM115Q12893 351 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 NAE1Q13564 534 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 KEAP1Q14145 624 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LRRC26Q2I0M4 334 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CCSMST1Q4G0I0 132 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 IQCCQ4KMZ1 466 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 BCL7AQ4VC05 210 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LRRC23Q53EV4 343 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 SPIN4Q56A73 249 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 C10orf62Q5T681 223 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 ACSM2BQ68CK6 577 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ZCCHC8Q6NZY4 707 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 EIF3MQ7L2H7 374 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 CYP4Z1Q86W10 505 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 FAM81AQ8TBF8 368 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 TBC1D15Q8TC07 691 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LZICQ8WZA0 190 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SGCDQ92629 289 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 MUL1Q969V5 352 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CXorf40BQ96DE9 158 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 COQ10AQ96MF6 247 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 DCUN1D5Q9BTE7 237 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ADNPQ9H2P0 1102 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 BTBD3Q9Y2F9 522 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LRRK1Q38SD2 2015 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 MUC22E2RYF6 1773 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 A0A0J9YVX5 310 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LILRB5O75023 590 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 UGT2B11O75310 529 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 RFPL2O75678 378 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SOD1P00441 154 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ACRP10323 421 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 JUNDP17535 347 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PCMT1P22061 227 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 DNAJA1P31689 397 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 NNMTP40261 264 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PREPP48147 710 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CRYBA2P53672 197 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PLA2G16P53816 162 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 NFATC3Q12968 1075 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 XKR5Q6UX68 686 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CEP68Q76N32 757 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CLECL1Q8IZS7 167 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LILRA3Q8N6C8 439 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 OR7G3Q8NG95 312 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 B4GALNT2Q8NHY0 566 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDPN-212ENST00000621990 TANKQ92844 425 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 FKBP10Q96AY3 582 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 DUSP26Q9BV47 211 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SGK2Q9HBY8 427 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PAK1IP1Q9NWT1 392 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 CORO2BQ9UQ03 480 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ORC6Q9Y5N6 252 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 U3KQV3 271 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 NUP210Q8TEM1 1887 aaPredicted RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 CHD7Q9P2D1 2997 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 GABRR3A8MPY1 467 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 BCKDKO14874 412 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 SPINT1O43278 529 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 JRKO75564 520 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 MYO1DO94832 1006 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ZNF682O95780 498 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 FABP3P05413 133 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ELFN1P0C7U0 828 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 CCNA2P20248 432 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 FPR1P21462 350 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 AGXTP21549 392 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 PPIBP23284 216 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 DAPP51397 102 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ITGA1P56199 1179 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 CXCR4P61073 352 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 PPP1R8Q12972 351 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 CDK5R2Q13319 367 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ANKRD26P1Q6NSI1 321 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ERAP2Q6P179 960 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ZNF621Q6ZSS3 439 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 PARS2Q7L3T8 475 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 KIAA1958Q8N8K9 716 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 OR10Q1Q8NGQ4 319 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 GOT1L1Q8NHS2 421 aaPredicted RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 HUS1BQ8NHY5 278 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 AP2M1Q96CW1 435 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 DTD2Q96FN9 168 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 MED8Q96G25 268 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 ZSWIM3Q96MP5 696 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 BARD1Q99728 777 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 TPT1P8Q9HAU6 139 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 HCFC2Q9Y5Z7 792 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 WNT6Q9Y6F9 365 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 PCM1Q15154 2024 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 SH3PXD2BA1X283 911 aa9.1□□□□□ -0.95
PDPN-212ENST00000621990 FOXE1O00358 373 aaPredicted RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 RNASET2O00584 256 aaKnown RBP9.1□□□□□ -0.95
PDPN-212ENST00000621990 NOL3O60936 208 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms