RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 CUL3Q13618 768 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 PTGISQ16647 500 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 USH1GQ495M9 461 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 EPC2Q52LR7 807 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 CCDC122Q5T0U0 273 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 FAM166AQ6J272 317 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 CTR9Q6PD62 1173 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 SHC4Q6S5L8 630 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 TRAPPC11Q7Z392 1133 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 VASH2Q86V25 355 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 PSTKQ8IV42 348 aaKnown RBP3.61□□□□□ -1.83
LRRC39-204ENST00000620882 ZNF679Q8IYX0 411 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 RDM1Q8NG50 284 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 THAP6Q8TBB0 222 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 CCDC110Q8TBZ0 833 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 RNF128Q8TEB7 428 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 ARHGAP45Q92619 1136 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 MTERF3Q96E29 417 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 SCMH1Q96GD3 660 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 QRFPRQ96P65 431 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 GAL3ST4Q96RP7 486 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 LRMDAQ9H2I8 198 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 TRPC7Q9HCX4 862 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 CENPMQ9NSP4 180 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 SLCO1C1Q9NYB5 712 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 SPG21Q9NZD8 308 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 DAPK2Q9UIK4 370 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 CLEC4AQ9UMR7 237 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 STRAPQ9Y3F4 350 aaKnown RBP3.61□□□□□ -1.83
LRRC39-204ENST00000620882 ZHX2Q9Y6X8 837 aa3.61□□□□□ -1.83
LRRC39-204ENST00000620882 MROH5Q6ZUA9 1318 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SLC9B1P1A6NJY1 282 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SDR42E2A6NKP2 422 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 MAPK13O15264 365 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CLDN14O95500 239 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SERPING1P05155 500 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 EPCAMP16422 314 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 GALP22466 123 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 TUBG1P23258 451 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CHMLP26374 656 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 C21orf33P30042 268 aaPredicted RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SLC9A3P48764 834 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 HTR6P50406 440 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 EIF3EP60228 445 aaKnown RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 DSC1Q08554 894 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 XKR9Q5GH70 373 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ETFRF1Q6IPR1 90 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 KLC3Q6P597 504 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ARMC9Q7Z3E5 817 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ADCK1Q86TW2 530 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 GLCCI1Q86VQ1 547 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 MMD2Q8IY49 270 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 TTC5Q8N0Z6 440 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 OR9A1PQ8NGU1 263 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 PIGBQ92521 554 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 THRSPQ92748 146 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 PIGTQ969N2 578 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CCDC51Q96ER9 411 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 C16orf58Q96GQ5 468 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ZNF560Q96MR9 790 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 NECTIN4Q96NY8 510 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 MYADMQ96S97 322 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 BTBD10Q9BSF8 475 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ZNF577Q9BSK1 485 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 NFKBIZQ9BYH8 718 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 NYXQ9GZU5 481 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SCAND2PQ9GZW5 306 aaPredicted RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SPRTNQ9H040 489 aaPredicted RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 TMEM117Q9H0C3 514 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ARRDC1-AS1Q9H2J1 176 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CLSTN2Q9H4D0 955 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SYNDIG1Q9H7V2 258 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 PRMT8Q9NR22 394 aaPredicted RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 POLE3Q9NRF9 147 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 TUBG2Q9NRH3 451 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 NRBP2Q9NSY0 501 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CHKBQ9Y259 395 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 GRIP1Q9Y3R0 1128 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 YIPF1Q9Y548 306 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 L7N2F9 121 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 TLR4O00206 839 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 POLR2DO15514 142 aaKnown RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SMAD6O43541 496 aaKnown RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 GMFGO60234 142 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 GPR137BO60478 399 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 WDR1O75083 606 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 DNAJB6O75190 326 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ZNF821O75541 412 aaPredicted RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 RFPL2O75678 378 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 CCDC172P0C7W6 258 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 HSPA8P11142 646 aaKnown RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 UGT1A6P19224 532 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 HNRNPA2B1P22626 353 aaKnown RBP3.6□□□□□ -1.83
LRRC39-204ENST00000620882 SFNP31947 248 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 PLTPP55058 493 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 MYL6P60660 151 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 ARF5P84085 180 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 FHL2Q14192 279 aa3.6□□□□□ -1.83
LRRC39-204ENST00000620882 NPTX1Q15818 432 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms