RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NIPSNAP2O75323 286 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 PDGFAP04085 211 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 CPA3P15088 417 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 BGNP21810 368 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 SKIV2L2P42285 1042 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 GLRBP48167 497 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 MLLT10P55197 1068 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 PCLAFQ15004 111 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 ATG16L1Q676U5 607 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 APLFQ8IW19 511 aaPredicted RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 C19orf47Q8N9M1 422 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 CFAP61Q8NHU2 1237 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 SREK1Q8WXA9 508 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 GPR78Q96P69 363 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 MRPL57Q9BQC6 102 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 SLC25A23Q9BV35 468 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 ING2Q9H160 280 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 MRPL46Q9H2W6 279 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 FGFR1OP2Q9NVK5 253 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 SPHK1Q9NYA1 384 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 XPR1Q9UBH6 696 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 CIDEBQ9UHD4 219 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 POLG2Q9UHN1 485 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 MED16Q9Y2X0 877 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 F8W8V4 182 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 CHRM5P08912 532 aaPredicted RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 RBP1P09455 135 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 MYL2P10916 166 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 CHRM3P20309 590 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 AGXTP21549 392 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 ALDH3A1P30838 453 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 PGDP52209 483 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 ACAP2Q15057 778 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 CHI3L2Q15782 390 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 C1orf189Q5VU69 101 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 TMEM207Q6UWW9 146 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 TBC1D21Q8IYX1 336 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 NKAPQ8N5F7 415 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 ZNF473Q8WTR7 871 aaKnown RBP15.48■□□□□ 0.07
CD40-207ENST00000620709 ANKRD49Q8WVL7 239 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 LRFN5Q96NI6 719 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 NLNQ9BYT8 704 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 FAM60AQ9NP50 221 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 TCFL5Q9UL49 500 aa15.48■□□□□ 0.07
CD40-207ENST00000620709 SLC5A10A0PJK1 596 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 A6NL46 340 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 C9J4A7 227 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 KDM1AO60341 852 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 OR2B3O76000 313 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 RAB40ALP0C0E4 278 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 ACADLP28330 430 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 RORAP35398 523 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 HSPA14Q0VDF9 509 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 TECRLQ5HYJ1 363 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 MLIPQ5VWP3 458 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 PAQR3Q6TCH7 311 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 ZYG11AQ6WRX3 759 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 SPATA6LQ8N4H0 392 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 C2orf73Q8N5S3 287 aaPredicted RBP15.47■□□□□ 0.07
CD40-207ENST00000620709 OR5K2Q8NHB8 316 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 PPP1R14CQ8TAE6 165 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 CD200R1Q8TD46 325 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 FAM136AQ96C01 138 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 TCTN2Q96GX1 697 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 OR2A14Q96R47 310 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 TSSK1BQ9BXA7 367 aa15.47■□□□□ 0.07
CD40-207ENST00000620709 SPRTNQ9H040 489 aaPredicted RBP15.47■□□□□ 0.07
CD40-207ENST00000620709 CPSF2Q9P2I0 782 aaKnown RBP15.47■□□□□ 0.07
CD40-207ENST00000620709 GPN3Q9UHW5 284 aaPredicted RBP15.47■□□□□ 0.07
CD40-207ENST00000620709 A0A0J9YY10 115 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 IQCF5A8MTL0 148 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 G3V2L1 256 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 EDF1O60869 148 aaKnown RBP15.46■□□□□ 0.07
CD40-207ENST00000620709 HBQ1P09105 142 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 CD1DP15813 335 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 OTX2P32243 289 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 PRKAA2P54646 552 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 FAM198BQ6UWH4 519 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 ZNF517Q6ZMY9 492 aaPredicted RBP15.46■□□□□ 0.07
CD40-207ENST00000620709 FAM47EQ6ZV65 393 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 C10orf107Q8IVU9 208 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 FAM20CQ8IXL6 584 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 TMEM151AQ8N4L1 468 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 PANX3Q96QZ0 392 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 UNKQ9C0B0 810 aaKnown RBP15.46■□□□□ 0.07
CD40-207ENST00000620709 DERL2Q9GZP9 239 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 DHRS7Q9Y394 339 aa15.46■□□□□ 0.07
CD40-207ENST00000620709 SPENQ96T58 3664 aaKnown RBP15.45■□□□□ 0.06
CD40-207ENST00000620709 TTLL8A6PVC2 850 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 TARM1B6A8C7 271 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 H2AFYO75367 372 aaKnown RBP15.45■□□□□ 0.06
CD40-207ENST00000620709 TPBGLP0DKB5 382 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 CBSLP0DN79 551 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 TFEBP19484 476 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 CCR7P32248 378 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 CBSP35520 551 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 CLCN7P51798 805 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 ATP6V0D1P61421 351 aa15.45■□□□□ 0.06
CD40-207ENST00000620709 PLOD1Q02809 727 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms