RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 ARHGAP19Q14CB8 494 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 SF1Q15637 639 aaKnown RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PHKG1Q16816 387 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 ZXDCQ2QGD7 858 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 KBTBD12Q3ZCT8 623 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PRAMEF17Q5VTA0 474 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 BROXQ5VW32 411 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 LRRC8EQ6NSJ5 796 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CYB5D1Q6P9G0 228 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CCDC81Q6ZN84 652 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 VASH2Q86V25 355 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 TAX1BP1Q86VP1 789 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 MCATQ8IVS2 390 aaKnown RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CACNA2D3Q8IZS8 1091 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 NLGN4XQ8N0W4 816 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 RAB42Q8N4Z0 105 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PPFIBP2Q8ND30 876 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 NLGN4YQ8NFZ3 816 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 OR8K5Q8NH50 307 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 ANKRD49Q8WVL7 239 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 ZUFSPQ96AP4 578 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 LINGO1Q96FE5 620 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 VPS39Q96JC1 886 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CCNL2Q96S94 520 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 RBBP8Q99708 897 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CPNE1Q99829 537 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 SLC12A9Q9BXP2 914 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 ULBP3Q9BZM4 244 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 FAM129AQ9BZQ8 928 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 SPRTNQ9H040 489 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 RHOJQ9H4E5 214 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 AKIRIN1Q9H9L7 192 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PARVBQ9HBI1 364 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 SYTL2Q9HCH5 934 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 NSMCE4AQ9NXX6 385 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 NINJ2Q9NZG7 142 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 LNPEPQ9UIQ6 1025 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 RARRES3Q9UL19 164 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PDE10AQ9Y233 779 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 POLR3KQ9Y2Y1 108 aaPredicted RBP6.26□□□□□ -1.41
BRCC3-209ENST00000620502 KLK4Q9Y5K2 254 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 CORINQ9Y5Q5 1042 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 PCM1Q15154 2024 aa6.26□□□□□ -1.41
BRCC3-209ENST00000620502 ACACBO00763 2458 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 CHD8Q9HCK8 2581 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 USP24Q9UPU5 2620 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 IGKV1-8A0A0C4DH67 115 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 TARM1B6A8C7 271 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 TMEM150CB9EJG8 249 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 K7ENP7 123 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 CDC7O00311 574 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 NRP2O60462 931 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SCRG1O75711 98 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 FKBP9O95302 570 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SYF2O95926 243 aaKnown RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 RECKO95980 971 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 NTRK1P04629 796 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 LIFP15018 202 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ZNF37AP17032 561 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 F8A1P23610 371 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 IMPA1P29218 277 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 STX2P32856 288 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 RORAP35398 523 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 HSD17B2P37059 387 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 GP5P40197 560 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 STAT5AP42229 794 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 RGS4P49798 205 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 UCNP55089 124 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 CXADRP78310 365 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 POU4F1Q01851 419 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 PRDX1Q06830 199 aaKnown RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ABHD18Q0P651 414 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ILF2Q12905 390 aaKnown RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SP140Q13342 867 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 EFTUD2Q15029 972 aaKnown RBP eCLIP6.25□□□□□ -1.412e-6■■■■■ 53.4
BRCC3-209ENST00000620502 ZKSCAN8Q15776 578 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 PPP1R3AQ16821 1122 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 TMEM201Q5SNT2 666 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 MANEAQ5SRI9 462 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 GRTP1Q5TC63 336 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ARHGAP40Q5TG30 622 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SLC6A19Q695T7 634 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 LCN10Q6JVE6 187 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 FBXO42Q6P3S6 717 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 FAM199XQ6PEV8 388 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 INO80CQ6PI98 192 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 FIGLAQ6QHK4 219 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SUSD1Q6UWL2 747 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 SBSNQ6UWP8 590 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ZNF517Q6ZMY9 492 aaPredicted RBP6.25□□□□□ -1.41
BRCC3-209ENST00000620502 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 TMEM126BQ8IUX1 230 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 MYO1HQ8N1T3 1032 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 ESX1Q8N693 406 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 PPM1NQ8N819 430 aa6.25□□□□□ -1.41
BRCC3-209ENST00000620502 OR2L3Q8NG85 312 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms