RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	BTN2A2	Q8WVV5	523 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	HSH2D	Q96JZ2	352 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	HHIP	Q96QV1	700 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	DUSP26	Q9BV47	211 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	TPT1P8	Q9HAU6	139 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	BLOC1S6	Q9UL45	172 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	FZD4	Q9ULV1	537 aa		10.83	□□□□□ -0.68
TP53-223	ENST00000618944	SCN8A	Q9UQD0	1980 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GNG14	A0A1W2PPG7	69 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SH3PXD2B	A1X283	911 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	WASH3P	C4AMC7	463 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SLC16A6	O15403	523 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MOSPD3	O75425	235 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	PSIP1	O75475	530 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MYO1D	O94832	1006 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ANGPTL1	O95841	491 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ZNF30	P17039	623 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SYN1	P17600	705 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	IL1RN	P18510	177 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MAGEA2	P43356	314 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MAP2K4	P45985	399 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	BMX	P51813	675 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	METAP1	P53582	386 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MLLT10	P55197	1068 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	PRMT2	P55345	433 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	C21orf59	P57076	290 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CSTF3	Q12996	717 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SPCS2	Q15005	226 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SMN1	Q16637	294 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CATSPERE	Q5SY80	951 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CPTP	Q5TA50	214 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ZNF697	Q5TEC3	545 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	LAIR1	Q6GTX8	287 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ANGPTL8	Q6UXH0	198 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	HORMAD1	Q86X24	394 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TRAM1L1	Q8N609	369 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	AP2M1	Q96CW1	435 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CNDP2	Q96KP4	475 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	RHNO1	Q9BSD3	238 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TM9SF3	Q9HD45	589 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	RASSF1	Q9NS23	344 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TMEM9	Q9P0T7	183 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	PSME2	Q9UL46	239 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	RUVBL1	Q9Y265	456 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	BCAS1	O75363	584 aa	Predicted RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CLTB	P09497	229 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GPX2	P18283	190 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	IMPA1	P29218	277 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	NNMT	P40261	264 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GP2	P55259	537 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	RPS13	P62277	151 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	LSM3	P62310	102 aa	Known RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	EMX1	Q04741	257 aa	Predicted RBP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TUBA3C	Q13748	450 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
TP53-223	ENST00000618944	IER5L	Q5T953	404 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GALNT18	Q6P9A2	607 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	B3GNT8	Q7Z7M8	397 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TMPRSS11B	Q86T26	416 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CFAP206	Q8IYR0	622 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ATG16L2	Q8NAA4	619 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	DDHD1	Q8NEL9	900 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	OR7G3	Q8NG95	312 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	OR4K1	Q8NGD4	311 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GIPC3	Q8TF64	312 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	ING5	Q8WYH8	240 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	GLYATL1	Q969I3	302 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	NEIL2	Q969S2	332 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	MRGPRX3	Q96LB0	322 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	CCM2	Q9BSQ5	444 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	IL36A	Q9UHA7	158 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	PCDHB11	Q9Y5F2	797 aa		10.82	□□□□□ -0.68
TP53-223	ENST00000618944	TRIM43B	A6NCK2	446 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	TRIM64B	A6NI03	449 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	ATG13	O75143	517 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	AP2A2	O94973	939 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	CAT	P04040	527 aa	Known RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	RHO	P08100	348 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	ELFN1	P0C7U0	828 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	DNAJA1	P31689	397 aa	Known RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	RYK	P34925	604 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	GSS	P48637	474 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	MEF2A	Q02078	507 aa	Predicted RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	CREM	Q03060	361 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	TOP3A	Q13472	1001 aa	Predicted RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	AQP6	Q13520	282 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	NPTX1	Q15818	432 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	GRHL2	Q6ISB3	625 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	DUS1L	Q6P1R4	473 aa	Known RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	C16orf87	Q6PH81	154 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	CCDC81	Q6ZN84	652 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	NEK10	Q6ZWH5	1172 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.81	□□□□□ -0.68
TP53-223	ENST00000618944	SYTL1	Q8IYJ3	562 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	NAGS	Q8N159	534 aa		10.81	□□□□□ -0.68
TP53-223	ENST00000618944	SLC15A4	Q8N697	577 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms