RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CPPED1Q9BRF8 314 aaPredicted RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 SORBS1Q9BX66 1292 aaKnown RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 ANKRD60Q9BZ19 345 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 SLC6A17Q9H1V8 727 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 OSGEPL1Q9H4B0 414 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 ZNF696Q9H7X3 374 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 TRIM39Q9HCM9 518 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 PNPLA3Q9NST1 481 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 THG1LQ9NWX6 298 aaKnown RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 SMPD3Q9NY59 655 aaPredicted RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 DGKBQ9Y6T7 804 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 MGAT4DA6NG13 374 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 H3BSA7 217 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 CLIC1O00299 241 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 B4GAT1O43505 415 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 ERN1O75460 977 aaKnown RBP11.97□□□□□ -0.49
CIITA-212ENST00000618207 PIM1P11309 404 aaPredicted RBP11.97□□□□□ -0.49
CIITA-212ENST00000618207 NPPBP16860 134 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 PDGFRLQ15198 375 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 CAPN13Q6MZZ7 669 aaPredicted RBP11.97□□□□□ -0.49
CIITA-212ENST00000618207 RIMKLAQ8IXN7 391 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 CHCHD4Q8N4Q1 142 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 ZFP28Q8NHY6 868 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 CSGALNACT1Q8TDX6 532 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 SH3GL1Q99961 368 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 MRPS26Q9BYN8 205 aaKnown RBP11.97□□□□□ -0.49
CIITA-212ENST00000618207 TMEM245Q9H330 911 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 A0A096LPI6 279 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 A0A1W2PP55 124 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 EVPLLA8MZ36 301 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 LILRB5O75023 590 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 MYO1DO94832 1006 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 NUDT7P0C024 238 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 GDI1P31150 447 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 TIE1P35590 1138 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 SPATS1Q496A3 300 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 C2orf27AQ580R0 203 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 GRHL2Q6ISB3 625 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 NRSN1Q8IZ57 195 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 TMIEQ8NEW7 156 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 OR56A3Q8NH54 315 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 ZFAND2BQ8WV99 257 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 NELL1Q92832 810 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 MAL2Q969L2 176 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 ZCCHC2Q9C0B9 1178 aaKnown RBP11.97□□□□□ -0.49
CIITA-212ENST00000618207 SFXN1Q9H9B4 322 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 PLXND1Q9Y4D7 1925 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 PCDHGA11Q9Y5H2 935 aa11.97□□□□□ -0.49
CIITA-212ENST00000618207 TRBV5-3A0A0A0MS03 114 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 GRXCR2A6NFK2 248 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 GABRR3A8MPY1 467 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 H3BNH8 94 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 UPK1AO00322 258 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 ALBP02768 609 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PRPS1L1P21108 318 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PTPN6P29350 595 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 MAT2AP31153 395 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 TAP2Q03519 686 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 SMU1Q2TAY7 513 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 CYBRD1Q53TN4 286 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 MED27Q6P2C8 311 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 SLCO4C1Q6ZQN7 724 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 SPRED1Q7Z699 444 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 NLRP8Q86W28 1048 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 ZDHHC13Q8IUH4 622 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PAPD5Q8NDF8 572 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 FGF14Q92915 247 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 UGT2B28Q9BY64 529 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 OSBPL6Q9BZF3 934 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 NKX2-4Q9H2Z4 354 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 TMEM45AQ9NWC5 275 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 ASIC5Q9NY37 505 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 DYRK1BQ9Y463 629 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 NUP210Q8TEM1 1887 aaPredicted RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 C1QTNF3-AMACRE9PGA6 284 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 H0Y858 1186 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 H0YJX3 145 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 hCG_2039718K7EN88 272 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PSMD11O00231 422 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 STATHP02808 62 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 FCARP24071 287 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PSMB5P28074 263 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 HNF4AP41235 474 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 ARSFP54793 590 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 RAE1P78406 368 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 DUSP6Q16828 381 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 SLC36A3Q495N2 470 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PARM1Q6UWI2 310 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 PRR23BQ6ZRT6 265 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 VTCN1Q7Z7D3 282 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 AADATQ8N5Z0 425 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 GOLM1Q8NBJ4 401 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 OR9A1PQ8NGU1 263 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 TESCQ96BS2 214 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms