RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LYPLAL1Q5VWZ2 237 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 DPY19L3Q6ZPD9 716 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 KCNMB4Q86W47 210 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 CHERPQ8IWX8 916 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 YAF2Q8IY57 180 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 TTYH2Q9BSA4 534 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 COPS4Q9BT78 406 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 NTMT1Q9BV86 223 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 AKIP1Q9NQ31 210 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 ELOVL2Q9NXB9 296 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 DEC1Q9P2X7 70 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 THAP10Q9P2Z0 257 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 MBD1Q9UIS9 605 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 RNF11Q9Y3C5 154 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 TICRRQ7Z2Z1 1910 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 MYO18AQ92614 2054 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 CKAP5Q14008 2032 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 EDDM13A0A1B0GTR0 161 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 FOXO6A8MYZ6 492 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 POC1B-GALNT4F8VUJ3 575 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 FCHO1O14526 889 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 FPGTO14772 594 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 ZNF780AO75290 641 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 TRBC1P01850 177 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 CAPNS1P04632 268 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 PRG2P13727 222 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 ZNF30P17039 623 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 NMBRP28336 390 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 SPRP35270 261 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 RNF144AP50876 292 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 DCDC1P59894 354 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 POLR2LP62875 67 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 TXNL4AP83876 142 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 BNC1Q01954 994 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 Q5BKY6 102 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 AFTPHQ6ULP2 937 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 LACC1Q8IV20 430 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 HIPK4Q8NE63 616 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 FBXO27Q8NI29 283 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 PRR11Q96HE9 360 aaPredicted RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 GPR22Q99680 433 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 TRMT61BQ9BVS5 477 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 RHOJQ9H4E5 214 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 CHRAC1Q9NRG0 131 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 ZNF224Q9NZL3 707 aa8.55□□□□□ -1.04
VPS11-206ENST00000614944 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
VPS11-206ENST00000614944 UBXN8O00124 270 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 RBBP9O75884 186 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 KCNK2O95069 426 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 DHFRP00374 187 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 MPOP05164 745 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 ARSAP15289 507 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 HOXC12P31275 282 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 HMGCLP35914 325 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 GSTM5P46439 218 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 P2RY4P51582 365 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 MLLT10P55197 1068 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SLC13A2Q13183 592 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 LETMD1Q6P1Q0 360 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 ASPGQ86U10 573 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 NLRP8Q86W28 1048 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 ANKFN1Q8N957 763 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 BANPQ8N9N5 519 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 OR2A12Q8NGT7 310 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 OR8K5Q8NH50 307 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 TCP10LQ8TDR4 215 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 ST8SIA4Q92187 359 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 GTF3AQ92664 365 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 TRIM56Q9BRZ2 755 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 GSN-AS1Q9NRJ2 163 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 UFSP2Q9NUQ7 469 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SH3BGRL2Q9UJC5 107 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 HCN2Q9UL51 889 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SYNDIG1LA6NDD5 238 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 AGAP14A8MT82 685 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 CXorf49A8MYA2 514 aaPredicted RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 SMAD6O43541 496 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 CPNE3O75131 537 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 MT-CO1P00395 513 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 IL1BP01584 269 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 ZNF250P15622 560 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 LPOP22079 712 aaPredicted RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 FMO4P31512 558 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 GJA4P35212 333 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 FAM214AQ32MH5 1076 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 MINDY4Q4G0A6 757 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 PRMT9Q6P2P2 845 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 TRMT10BQ6PF06 316 aaKnown RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 GPRIN3Q6ZVF9 776 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 TAB3Q8N5C8 712 aaPredicted RBP8.54□□□□□ -1.04
VPS11-206ENST00000614944 ZHX1-C8orf76Q96EF9 292 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SIPA1Q96FS4 1042 aa8.54□□□□□ -1.04
VPS11-206ENST00000614944 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms