RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 FBXL4Q9UKA2 621 aa17.33■□□□□ 0.36
VCX3A-203ENST00000612369 PLAAQ9Y263 795 aa17.33■□□□□ 0.36
VCX3A-203ENST00000612369 SNX24Q9Y343 169 aa17.33■□□□□ 0.36
VCX3A-203ENST00000612369 SETXQ7Z333 2677 aaKnown RBP17.33■□□□□ 0.36
VCX3A-203ENST00000612369 ANXA5P08758 320 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 GRK3P35626 688 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 CALCOCO2Q13137 446 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 NAE1Q13564 534 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 PHKG1Q16816 387 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 IRAK1BP1Q5VVH5 260 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 SLC6A19Q695T7 634 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 SHISA6Q6ZSJ9 500 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 OR11G2Q8NGC1 345 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 ANKRD7Q92527 254 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 MMABQ96EY8 250 aaPredicted RBP17.32■□□□□ 0.36
VCX3A-203ENST00000612369 HAUS8Q9BT25 410 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 TGIF2Q9GZN2 237 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 ATG10Q9H0Y0 220 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 SYNPO2LQ9H987 977 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 MKKSQ9NPJ1 570 aaPredicted RBP17.32■□□□□ 0.36
VCX3A-203ENST00000612369 ARL15Q9NXU5 204 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 WHRNQ9P202 907 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 TRPC4Q9UBN4 977 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 C3orf18Q9UK00 162 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 MAP4K5Q9Y4K4 846 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 FLNCQ14315 2725 aa17.32■□□□□ 0.36
VCX3A-203ENST00000612369 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
VCX3A-203ENST00000612369 VPS4BO75351 444 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 ITGA3P26006 1051 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 AVPR1BP47901 424 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 CSNK1G2P78368 415 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 VWA2Q5GFL6 755 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 MBOAT1Q6ZNC8 495 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 STRA8Q7Z7C7 330 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 PLD3Q8IV08 490 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 ZBED8Q8IZ13 594 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 NKAPQ8N5F7 415 aaKnown RBP17.31■□□□□ 0.36
VCX3A-203ENST00000612369 GALNT11Q8NCW6 608 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 OLFM1Q99784 485 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 VPS4AQ9UN37 437 aa17.31■□□□□ 0.36
VCX3A-203ENST00000612369 NOVA2Q9UNW9 492 aaKnown RBP17.31■□□□□ 0.36
VCX3A-203ENST00000612369 SPENQ96T58 3664 aaKnown RBP17.3■□□□□ 0.36
VCX3A-203ENST00000612369 H0YIG0 161 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 MAP2K7O14733 419 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 FOXS1O43638 330 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 ACPPP15309 386 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 NPPBP16860 134 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 CASQ1P31415 396 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
VCX3A-203ENST00000612369 FASTKD3Q14CZ7 662 aaKnown RBP17.3■□□□□ 0.36
VCX3A-203ENST00000612369 ATG9BQ674R7 924 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 VN1R4Q7Z5H5 301 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 ZC3HC1Q86WB0 502 aaKnown RBP17.3■□□□□ 0.36
VCX3A-203ENST00000612369 ZADH2Q8N4Q0 377 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 AMER3Q8N944 861 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 Q8NA96 180 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 CAMKVQ8NCB2 501 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 OR56A3Q8NH54 315 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 PYROXD1Q8WU10 500 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 FBXL8Q96CD0 374 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 VPS39Q96JC1 886 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 YIPF2Q9BWQ6 316 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 MFRPQ9BY79 579 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 LHPPQ9H008 270 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 B3GNT3Q9Y2A9 372 aa17.3■□□□□ 0.36
VCX3A-203ENST00000612369 A0A0A6YYC8 382 aaPredicted RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 A0A1W2PQ72 361 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 I3L1I5 382 aaPredicted RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 P2RX6O15547 441 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 NSA2O95478 260 aaKnown RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 HPP00738 406 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 ZNF37AP17032 561 aaPredicted RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 CXCR2P25025 360 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 EMP2P54851 167 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 INPP5JQ15735 1006 aaPredicted RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 AGAP7PQ5VUJ5 663 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 CYS1Q717R9 158 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 LAPTM4BQ86VI4 370 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 ABHD11Q8NFV4 315 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 ALKBH8Q96BT7 664 aaKnown RBP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 TM4SF19Q96DZ7 209 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 AGAP4Q96P64 663 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 SARGQ9BW04 601 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 PSAT1Q9Y617 370 aa17.29■□□□□ 0.36
VCX3A-203ENST00000612369 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
VCX3A-203ENST00000612369 FAM95CA0A1B0GW59 222 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 IDSB3KWA1 339 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 MASP2O00187 686 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 RAD51CO43502 376 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 HEXBP07686 556 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 CYC1P08574 325 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 CCR8P51685 355 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
VCX3A-203ENST00000612369 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 IGFL2Q6UWQ7 119 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 NDUFAF7Q7L592 441 aa17.28■□□□□ 0.36
VCX3A-203ENST00000612369 PARP9Q8IXQ6 854 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms