RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZSWIM3Q96MP5 696 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 MTERF1Q99551 399 aaKnown RBP10.09□□□□□ -0.79
PABPC1-224ENST00000610907 AMBRA1Q9C0C7 1298 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 SOX17Q9H6I2 414 aaPredicted RBP10.09□□□□□ -0.79
PABPC1-224ENST00000610907 ITM2CQ9NQX7 267 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 ATP6V1HQ9UI12 483 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 GPR34Q9UPC5 381 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 TSC22D4Q9Y3Q8 395 aa10.09□□□□□ -0.79
PABPC1-224ENST00000610907 MAGED1Q9Y5V3 778 aaPredicted RBP10.09□□□□□ -0.79
PABPC1-224ENST00000610907 EDDM13A0A1B0GTR0 161 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 MGAT4DA6NG13 374 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 KPNA3O00505 521 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 RNASET2O00584 256 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 HS6ST1O60243 411 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 SEC14L2O76054 403 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 SEMG1P04279 462 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ANXA4P09525 319 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 EEF1B2P24534 225 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 DNAJA1P31689 397 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 PREPP48147 710 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ISL1P61371 349 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 EIF4HQ15056 248 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 TEAD4Q15561 434 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF648Q5T619 568 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF691Q5VV52 312 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 PDE12Q6L8Q7 609 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF551Q7Z340 670 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 R3HCC1LQ7Z5L2 792 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 GRASPQ7Z6J2 395 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 LAS2Q8IYD9 372 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 CHPFQ8IZ52 775 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 C1orf52Q8N6N3 182 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 CHDHQ8NE62 594 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 GOT1L1Q8NHS2 421 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 HUS1BQ8NHY5 278 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 FBLIM1Q8WUP2 373 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 OR8D1Q8WZ84 308 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 UBE2E3Q969T4 207 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ARMC5Q96C12 935 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 SGPP1Q9BX95 441 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 EBPLQ9BY08 206 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 BHLHE41Q9C0J9 482 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 TRIT1Q9H3H1 467 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 DPEP2Q9H4A9 486 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 TPT1P8Q9HAU6 139 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 TRIM39Q9HCM9 518 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ATAD3AQ9NVI7 634 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF282Q9UDV7 671 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 TMEFF2Q9UIK5 374 aaPredicted RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 MRPS23Q9Y3D9 190 aaKnown RBP10.08□□□□□ -0.8
PABPC1-224ENST00000610907 DYRK1BQ9Y463 629 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 PCDHGA8Q9Y5G5 932 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 DOCK6Q96HP0 2047 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 NOTCH4Q99466 2003 aa10.08□□□□□ -0.8
PABPC1-224ENST00000610907 GABRR3A8MPY1 467 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 M0QX08 132 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 TLL1O43897 1013 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 VEGFDO43915 354 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 NOBOXO60393 691 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 MRPS14O60783 128 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 LILRB5O75023 590 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 CPSF4O95639 269 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF682O95780 498 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 FABP3P05413 133 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 RB1P06400 928 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 C1GALT1C1LP0DN25 315 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 LAMP1P11279 417 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 EPCAMP16422 314 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 NPPBP16860 134 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 CEBPBP17676 345 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 FPR1P21462 350 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 IDSP22304 550 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 ELK4P28324 431 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 TIA1P31483 386 aaKnown RBP eCLIP10.07□□□□□ -0.85e-21■□□□□ 8.3
PABPC1-224ENST00000610907 BDKRB1P46663 353 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 IST1P53990 364 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 CXCR4P61073 352 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 RAE1P78406 368 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 NTHL1P78549 312 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 DDX39BQ13838 428 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 GTF2H3Q13889 308 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 KEAP1Q14145 624 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 SPIDRQ14159 915 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 ELOAQ14241 798 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 HNRNPA1L2Q32P51 320 aaKnown RBP10.07□□□□□ -0.8
PABPC1-224ENST00000610907 TMEM52BQ4KMG9 183 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 PTOV1Q86YD1 416 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 SYNPOQ8N3V7 929 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 PIK3C3Q8NEB9 887 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 OR9A1PQ8NGU1 263 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 ZNF480Q8WV37 535 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
PABPC1-224ENST00000610907 MYLIPQ8WY64 445 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms