RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ELOAQ14241 798 aaKnown RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ARMCX4Q5H9R4 360 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 C10orf62Q5T681 223 aaPredicted RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ARMC12Q5T9G4 340 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 NOXRED1Q6NXP6 359 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 CLIP4Q8N3C7 705 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 STX19Q8N4C7 294 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 TTC9BQ8N6N2 239 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 TP53INP1Q96A56 240 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 METTL2AQ96IZ6 378 aaKnown RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 REXO4Q9GZR2 422 aaKnown RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ASB8Q9H765 288 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 FBXL12Q9NXK8 326 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ENOPH1Q9UHY7 261 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ZNF106Q9H2Y7 1883 aaKnown RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 PLXNA4Q9HCM2 1894 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 A8MU76 341 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 PDZK1P1A8MUH7 402 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 SCAMP3O14828 347 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 ITGB6P18564 788 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 POLR2EP19388 210 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 PCGF2P35227 344 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 THPOP40225 353 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 OR2B6P58173 313 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 AP1S1P61966 158 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 RPS24P62847 133 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 TWF1Q12792 350 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 TEAD4Q15561 434 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 C6orf183Q5T699 404 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 PDE12Q6L8Q7 609 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 FAM151BQ6UXP7 276 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 SLC22A15Q8IZD6 547 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 OR6F1Q8NGZ6 308 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 MTFMTQ96DP5 389 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 MYO19Q96H55 970 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 TTLL2Q9BWV7 592 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 CDCA4Q9BXL8 241 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 CNOT2Q9NZN8 540 aaKnown RBP21.64■■□□□ 1.06
SHANK2-220ENST00000608988 PRSS21Q9Y6M0 314 aa21.64■■□□□ 1.06
SHANK2-220ENST00000608988 SH3D21A4FU49 640 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 EFCAB10A6NFE3 127 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 CAPN5O15484 640 aaPredicted RBP21.64■■□□□ 1.05
SHANK2-220ENST00000608988 TLL1O43897 1013 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 SCN2BO60939 215 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 UGT2B17O75795 530 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 PARNO95453 639 aaKnown RBP21.64■■□□□ 1.05
SHANK2-220ENST00000608988 EOMESO95936 686 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 GABRB1P18505 474 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 SLC15A1P46059 708 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 HNMTP50135 292 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 PTPN5P54829 565 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 ARF5P84085 180 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 STARD3Q14849 445 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 RNF219Q5W0B1 726 aaPredicted RBP21.64■■□□□ 1.05
SHANK2-220ENST00000608988 GPR153Q6NV75 609 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 FAM124AQ86V42 546 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 C2orf15Q8WU43 125 aaKnown RBP21.64■■□□□ 1.05
SHANK2-220ENST00000608988 EID2BQ96D98 161 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 DOHHQ9BU89 302 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 BOCQ9BWV1 1114 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 RUBCNLQ9H714 662 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 PCDHB9Q9Y5E1 797 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 PCDHGA2Q9Y5H1 932 aa21.64■■□□□ 1.05
SHANK2-220ENST00000608988 LOC100506127A0A0U1RQW1 187 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 ANKRD34BA5PLL1 514 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 GPR39O43194 453 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 IGHA2P01877 340 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 CD72P21854 359 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 GRK5P34947 590 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 DDOSTP39656 456 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 HTR3AP46098 478 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 WNT3P56703 355 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 LRRC74AQ0VAA2 488 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 CARTPTQ16568 116 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 ZNF621Q6ZSS3 439 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 KRT73Q86Y46 540 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 ZNF280BQ86YH2 543 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 CBARPQ8N350 705 aaPredicted RBP21.63■■□□□ 1.05
SHANK2-220ENST00000608988 KCNC2Q96PR1 638 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 SLC30A2Q9BRI3 323 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 RACGAP1Q9H0H5 632 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 OR51E2Q9H255 320 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 CHST8Q9H2A9 424 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 BTNL2Q9UIR0 455 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 PCDHGB2Q9Y5G2 931 aa21.63■■□□□ 1.05
SHANK2-220ENST00000608988 TNFRSF11BO00300 401 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 B4GALT3O60512 393 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 VIPP01282 170 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 C8GP07360 202 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 RRM2P31350 389 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 PRIM2P49643 509 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 NKX2-5P52952 324 aaPredicted RBP21.62■■□□□ 1.05
SHANK2-220ENST00000608988 CCL14Q16627 93 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 SYT12Q8IV01 421 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 SIMC1Q8NDZ2 872 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 RASSF5Q8WWW0 418 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 APIPQ96GX9 242 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 CEP19Q96LK0 163 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 NDEL1Q9GZM8 345 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms