RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 IL27RAQ6UWB1 636 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 LARP4Q71RC2 724 aaKnown RBP eCLIP11.11□□□□□ -0.631e-7■■□□□ 12.6
CTCFL-221ENST00000608903 DDIASQ8IXT1 998 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 RBM12BQ8IXT5 1001 aaKnown RBP11.11□□□□□ -0.63
CTCFL-221ENST00000608903 RAB42Q8N4Z0 105 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 EID2Q8N6I1 236 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 C19orf60Q96EN9 201 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 FAR2Q96K12 515 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 APOLD1Q96LR9 279 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 SLC29A3Q9BZD2 475 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 KLHL25Q9H0H3 589 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 EHD1Q9H4M9 534 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 AKTIPQ9H8T0 292 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 TAS2R1Q9NYW7 299 aa11.11□□□□□ -0.63
CTCFL-221ENST00000608903 OR5K3A6NET4 321 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 H0YIV9 168 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 DFNA5O60443 496 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 ETHE1O95571 254 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 SERPINA6P08185 405 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 SYPP08247 313 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 CALB2P22676 271 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 HMOX2P30519 316 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 GRIA3P42263 894 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 FCRL6Q6DN72 434 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 ZNF425Q6IV72 752 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 LAS2Q8IYD9 372 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 ANKRD53Q8N9V6 530 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 OR7G3Q8NG95 312 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 ANKRD27Q96NW4 1050 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 RAB3IPQ96QF0 476 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-221ENST00000608903 SIKE1Q9BRV8 207 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 DPH7Q9BTV6 452 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 ACPTQ9BZG2 426 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 PELI2Q9HAT8 420 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 MRPS30Q9NP92 439 aaKnown RBP11.1□□□□□ -0.63
CTCFL-221ENST00000608903 PADI4Q9UM07 663 aa11.1□□□□□ -0.63
CTCFL-221ENST00000608903 GSAPA4D1B5 854 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 CDX4O14627 284 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 GIPC1O14908 333 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PCDHGA12O60330 932 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 CCDC22O60826 627 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 UBXN7O94888 489 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 CER1O95813 267 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 RETP07949 1114 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PRR35P0CG20 571 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ESRRAP11474 423 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 HNF4AP41235 474 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 RASSF2P50749 326 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 REEP5Q00765 189 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 KIR2DS3Q14952 304 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ZIC1Q15915 447 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PERM1Q5SV97 790 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FRG2Q64ET8 278 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 GUSBP11Q6P575 273 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 KIRREL3Q8IZU9 778 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 MARK4Q96L34 752 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FRG2BQ96QU4 278 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 MTERF1Q99551 399 aaKnown RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SLC38A3Q99624 504 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 BTBD10Q9BSF8 475 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 MDC1Q14676 2089 aaKnown RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FRYLO94915 3013 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 TRPC5OSA6NMA1 111 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 E9PBE3 544 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 HAT1O14929 419 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 GSC2O15499 205 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 KDM1AO60341 852 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 KLHL41O60662 606 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SH3BGRLO75368 114 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ULK1O75385 1050 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PROS1P07225 676 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ALDOCP09972 364 aaKnown RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 CCR8P51685 355 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 NR1D2Q14995 579 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ZCCHC8Q6NZY4 707 aaKnown RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FBXO42Q6P3S6 717 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SPESP1Q6UW49 350 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PAQR7Q86WK9 346 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-221ENST00000608903 HUS1BQ8NHY5 278 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 ACTRT2Q8TDY3 377 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SELENOMQ8WWX9 145 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 SLC45A3Q96JT2 553 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 FCRL4Q96PJ5 515 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 AICDAQ9GZX7 198 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 PARD6AQ9NPB6 346 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 TCF7L2Q9NQB0 619 aa11.09□□□□□ -0.63
CTCFL-221ENST00000608903 G3BP2Q9UN86 482 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms