RNA–Protein interactions for RNA: ENST00000604133.1

SRGAP2-208, Transcript of SLIT-ROBO Rho GTPase activating protein 2, human

TSL 5

Gene SRGAP2, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRGAP2-208	ENST00000604133	IGKV3-20	P01619	116 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CFC1B	P0CG36	223 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CFC1	P0CG37	223 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PRSS56	P0CW18	603 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CHRNA7	P36544	502 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	RPL21	P46778	160 aa	Known RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GSDMD	P57764	484 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CDR2	Q01850	454 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NCBP1	Q09161	790 aa	Known RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	KIAA1644	Q3SXP7	199 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GTDC1	Q4AE62	458 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM133B	Q5BKY9	247 aa	Known RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	DCLRE1A	Q6PJP8	1040 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	RUFY3	Q7L099	469 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PLA2G4D	Q86XP0	818 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TICAM2	Q86XR7	235 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	KLHDC1	Q8N7A1	406 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	OR4K1	Q8NGD4	311 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	OR10Q1	Q8NGQ4	319 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GRAPL	Q8TC17	118 aa	Predicted RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	COG3	Q96JB2	828 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PRAC1	Q96KF2	57 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PIGQ	Q9BRB3	760 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GTPBP2	Q9BX10	602 aa	Known RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	KRTAP17-1	Q9BYP8	105 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PRRG4	Q9BZD6	226 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	OR2B2	Q9GZK3	357 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	MIS12	Q9H081	205 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	LSG1	Q9H089	658 aa	Known RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	HYPK	Q9NX55	129 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	P4HTM	Q9NXG6	502 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	C2CD2	Q9Y426	696 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TUBGCP6	Q96RT7	1819 aa		4.9	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ADGRL3	Q9HAR2	1447 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TCF20	Q9UGU0	1960 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PXDNL	A1KZ92	1463 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	SMCHD1	A6NHR9	2005 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	IGHV4-61	A0A0C4DH41	118 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133		A0A0G2JLW4	131 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ARHGEF37	A1IGU5	675 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CASTOR2	A6NHX0	329 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM86B1	E9PN63	330 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	BLOC1S5-TXNDC5	H3BN57	136 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CCL24	O00175	119 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NEMF	O60524	1076 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NADK	O95544	446 aa	Predicted RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	IGHV4-59	P01825	116 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM86B2	P0C5J1	330 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	IGHV4-31	P0DP07	118 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PDGFRA	P16234	1089 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	HOXC8	P31273	242 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	SP3	Q02447	781 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	RRS1	Q15050	365 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CTU2	Q2VPK5	515 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FFAR4	Q5NUL3	377 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GALNTL5	Q7Z4T8	443 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PIGZ	Q86VD9	579 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NUDT13	Q86X67	352 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	UNC5CL	Q8IV45	518 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CNBD1	Q8NA66	436 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	OR52N5	Q8NH56	324 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	KCNE4	Q8WWG9	221 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	PROX1	Q92786	737 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GBP5	Q96PP8	586 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	UPF3B	Q9BZI7	483 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TLE6	Q9H808	572 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	XAB2	Q9HCS7	855 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FGF21	Q9NSA1	209 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	DDX19A	Q9NUU7	478 aa	Known RBP	4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	SPHK1	Q9NYA1	384 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	SMC3	Q9UQE7	1217 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	EXOC6B	Q9Y2D4	811 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	SPATA31D1	Q6ZQQ2	1576 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TTC21B	Q7Z4L5	1316 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	MAP3K5	Q99683	1374 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TECPR2	O15040	1411 aa		4.89	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CPS1	P31327	1500 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	DIP2C	Q9Y2E4	1556 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM72C	H0Y354	149 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ARPC2	O15144	300 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	IRF2	P14316	349 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	EPCAM	P16422	314 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ITGA3	P26006	1051 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	U2AF2	P26368	475 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	CHRNB4	P30926	498 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	GP5	P40197	560 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	LBX1	P52954	281 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TUBB4B	P68371	445 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	TFCP2	Q12800	502 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NONO	Q15233	471 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	NPTX1	Q15818	432 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	LACTB2	Q53H82	288 aa	Predicted RBP	4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	C9orf50	Q5SZB4	431 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM72A	Q5TYM5	149 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ARHGAP17	Q68EM7	881 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	FAM72D	Q6L9T8	149 aa		4.88	□□□□□ -1.63
SRGAP2-208	ENST00000604133	ZSCAN25	Q6NSZ9	544 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms