RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 EMC7Q9NPA0 242 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 IL1RAPQ9NPH3 570 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 MED17Q9NVC6 651 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 IL19Q9UHD0 177 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 PHF11Q9UIL8 331 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 SLC39A10Q9ULF5 831 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 ERVW-1Q9UQF0 538 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 PDE10AQ9Y233 779 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 KCNIP3Q9Y2W7 256 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 A0A075B6Q4 140 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 AQP12BA6NM10 295 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 KPNA7A9QM74 516 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SLC22A3O75751 556 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PGLSO95336 258 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 DIRAS3O95661 229 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 GCP02774 474 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 BPGMP07738 259 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 GSTP1P09211 210 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 CD3GP09693 182 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ANXA7P20073 488 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PVALBP20472 110 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 MAGP20916 626 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 GALP22466 123 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 GLRA2P23416 452 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 DNASE1P24855 282 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 LTKP29376 864 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 RPS9P46781 194 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TGM4P49221 684 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 RAB5BP61020 215 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 HYAL2Q12891 473 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 OCLNQ16625 522 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 NHLRC3Q5JS37 347 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 USP30Q70CQ3 517 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 R3HCC1LQ7Z5L2 792 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SLC51AQ86UW1 340 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 AQP12AQ8IXF9 295 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 NIM1KQ8IY84 436 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TMEM132CQ8N3T6 1108 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 FAM181AQ8N9Y4 354 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SYT14Q8NB59 555 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 HGDQ93099 445 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 RAB24Q969Q5 203 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 Q96MT0 163 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ASB16Q96NS5 453 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 NODALQ96S42 347 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ITM2CQ9NQX7 267 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TRMT13Q9NUP7 481 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 NCKAP1Q9Y2A7 1128 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 MMACHCQ9Y4U1 282 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ALG6Q9Y672 507 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 H7C4K7 107 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 HPGDSO60760 199 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SDC3O75056 442 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SRP72O76094 671 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SUPT7LO94864 414 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ENDOD1O94919 500 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 S1PR4O95977 384 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 MOCS2O96007 188 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 HEXAP06865 529 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SPP1P10451 314 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 CHRM3P20309 590 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 HOXA9P31269 272 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 STAT5AP42229 794 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PTGFRP43088 359 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ASPAP45381 313 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 KCNJ1P48048 391 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 KCNJ3P48549 501 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 GTF2IP78347 998 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 SCN1BQ07699 218 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TATDN3Q17R31 274 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PTPN20Q4JDL3 420 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 DHRS7BQ6IAN0 325 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TAF2Q6P1X5 1199 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 RBMS3Q6XE24 437 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 CHST15Q7LFX5 561 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ADHFE1Q8IWW8 467 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ADPRHL1Q8NDY3 354 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 Q8NFD4 153 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TMEM143Q96AN5 459 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ELMO3Q96BJ8 720 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TRMT61AQ96FX7 289 aaKnown RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ZBED3Q96IU2 234 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-215ENST00000602574 MEGF10Q96KG7 1140 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 NT5C1AQ9BXI3 368 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 DGCR6LQ9BY27 220 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 PRRG3Q9BZD7 231 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ING2Q9H160 280 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ASB8Q9H765 288 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 C3orf14Q9HBI5 128 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 KRT84Q9NSB2 600 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms