RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 DDX53Q86TM3 631 aaKnown RBP13.98□□□□□ -0.17
SMG9-211ENST00000601170 SLCO6A1Q86UG4 719 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 ZNF540Q8NDQ6 660 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 MED8Q96G25 268 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 DUSP26Q9BV47 211 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 REEP1Q9H902 201 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 THUMPD1Q9NXG2 353 aaKnown RBP13.98□□□□□ -0.17
SMG9-211ENST00000601170 PCDHB11Q9Y5F2 797 aa13.98□□□□□ -0.17
SMG9-211ENST00000601170 CXorf51AA0A1B0GTR3 108 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 CLDN25C9JDP6 229 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 TOR1BO14657 336 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SH3BGRLO75368 114 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 MT-ND2P03891 347 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 NUDT7P0C024 238 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 ACVR2AP27037 513 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 LSM3P62310 102 aaKnown RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 POLR2LP62875 67 aaKnown RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 ZNF33BQ06732 778 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 KCNC3Q14003 757 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 DGCR6Q14129 220 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 ZNF846Q147U1 533 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 MAD2L1BPQ15013 274 aaPredicted RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 KIAA1614Q5VZ46 1190 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 ADNP2Q6IQ32 1131 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 GDPD4Q6W3E5 623 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 RASGRP3Q8IV61 690 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SYNPOQ8N3V7 929 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 NDNFQ8TB73 568 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 FOXJ1Q92949 421 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 BCL7BQ9BQE9 202 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 FAM83DQ9H4H8 585 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SIRT5Q9NXA8 310 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SPG21Q9NZD8 308 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 FZD4Q9ULV1 537 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 SCAMP2O15127 329 aaKnown RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 SLC22A1O15245 554 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 TGM5O43548 720 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 FAM20BO75063 409 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 ETHE1O95571 254 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 FADS2O95864 444 aaKnown RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 LRG1P02750 347 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 PSMB9P28065 219 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 ALDH4A1P30038 563 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 VEZF1Q14119 521 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 Q6ZVL8 140 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 TSPYL5Q86VY4 417 aaPredicted RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 CLP1Q92989 425 aaKnown RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 GLMNQ92990 594 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 YIPF6Q96EC8 236 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 C11orf24Q96F05 449 aaPredicted RBP13.97□□□□□ -0.17
SMG9-211ENST00000601170 SLC46A2Q9BY10 475 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 VPS4AQ9UN37 437 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 CCL26Q9Y258 94 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 PLXNA2O75051 1894 aa13.97□□□□□ -0.17
SMG9-211ENST00000601170 NEDD8-MDP1E9PL57 170 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 MYO1DO94832 1006 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 ZNF30P17039 623 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 ETV3P41162 512 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CD97P48960 835 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CCR3P51677 355 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CRYBA2P53672 197 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 C21orf58P58505 322 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 NAE1Q13564 534 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CLCA4Q14CN2 919 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CCSMST1Q4G0I0 132 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 SYT6Q5T7P8 510 aaPredicted RBP13.96□□□□□ -0.17
SMG9-211ENST00000601170 GRHL2Q6ISB3 625 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 P2RY8Q86VZ1 359 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 CCDC71Q8IV32 467 aaPredicted RBP13.96□□□□□ -0.17
SMG9-211ENST00000601170 CPA6Q8N4T0 437 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 OR2A12Q8NGT7 310 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 ZNF689Q96CS4 500 aaPredicted RBP13.96□□□□□ -0.17
SMG9-211ENST00000601170 OR4K3Q96R72 315 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 SGK2Q9HBY8 427 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 HMG20AQ9NP66 347 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 NECTIN3Q9NQS3 549 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 RASSF1Q9NS23 344 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 SH3GLB1Q9Y371 365 aa13.96□□□□□ -0.17
SMG9-211ENST00000601170 A0A1W2PQ67 120 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 GABRR3A8MPY1 467 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 FADS2P1A8MWK0 482 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 H0YIV9 168 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 M0R3G1 203 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 RGS10O43665 173 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 PSIP1O75475 530 aaKnown RBP13.96□□□□□ -0.18
SMG9-211ENST00000601170 C9P02748 559 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 AQP1P29972 269 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 KRT20P35900 424 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 BCAP31P51572 246 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 VBP1P61758 197 aa13.96□□□□□ -0.18
SMG9-211ENST00000601170 RAE1P78406 368 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms