RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 DBN1Q16643 649 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 IGFL3Q6UXB1 125 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 ZC3HC1Q86WB0 502 aaKnown RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 GPR135Q8IZ08 494 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 DNAJC22Q8N4W6 341 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 ULK4Q96C45 1275 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 TCF12Q99081 682 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 DPH2Q9BQC3 489 aaPredicted RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 SLC29A3Q9BZD2 475 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 CCDC68Q9H2F9 335 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 IFT80Q9P2H3 777 aaPredicted RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 DCDC2Q9UHG0 476 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 SLC5A6Q9Y289 635 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 COPG1Q9Y678 874 aaKnown RBP13.14□□□□□ -0.31
IRF3-225ENST00000600022 APCP25054 2843 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 POLEQ07864 2286 aa13.14□□□□□ -0.31
IRF3-225ENST00000600022 FBN2P35556 2912 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 OTOGQ6ZRI0 2925 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 TYROBPO43914 113 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 CREB1P16220 341 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 CRABP2P29373 138 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 CRHR1P34998 444 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 RPA3P35244 121 aaPredicted RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 CCNFP41002 786 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 FOLR3P41439 243 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 MAGEA12P43365 314 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 DCDP81605 110 aaKnown RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 CTBP1Q13363 440 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 SEMA3AQ14563 771 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 USP10Q14694 798 aaKnown RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 GPR33Q49SQ1 333 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 NKAIN1Q4KMZ8 207 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 Q6ZS92 163 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 SHISA6Q6ZSJ9 500 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 CCDC91Q7Z6B0 441 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 HPS6Q86YV9 775 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 TRIM42Q8IWZ5 723 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 SREK1Q8WXA9 508 aaKnown RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 PTERQ96BW5 349 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 GPR22Q99680 433 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 SNX15Q9NRS6 342 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 INTS10Q9NVR2 710 aaKnown RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 G3BP2Q9UN86 482 aaKnown RBP13.13□□□□□ -0.31
IRF3-225ENST00000600022 ASF1AQ9Y294 204 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
IRF3-225ENST00000600022 SNRNP200O75643 2136 aaKnown RBP13.12□□□□□ -0.31
IRF3-225ENST00000600022 FAM95CA0A1B0GW59 222 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 MAP3K7O43318 606 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 OR1I1O60431 355 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 NDUFS3O75489 264 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 S1PR4O95977 384 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 AHSGP02765 367 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 GSTA1P08263 222 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
IRF3-225ENST00000600022 HBQ1P09105 142 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 PRF1P14222 555 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 STMN1P16949 149 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 ALAS2P22557 587 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 GRIA3P42263 894 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 TTPAP49638 278 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 POU4F1Q01851 419 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 RPA4Q13156 261 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 C1QL3Q5VWW1 255 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 LYPLAL1Q5VWZ2 237 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 VRK3Q8IV63 474 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 GPATCH11Q8N954 259 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 CLEC1AQ8NC01 280 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 TCP10LQ8TDR4 215 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
IRF3-225ENST00000600022 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 C5orf34Q96MH7 638 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 VPS11Q9H270 941 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 FBXO6Q9NRD1 293 aaPredicted RBP13.12□□□□□ -0.31
IRF3-225ENST00000600022 MID2Q9UJV3 735 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 PADI2Q9Y2J8 665 aa13.12□□□□□ -0.31
IRF3-225ENST00000600022 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms