RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 EFEMP2O95967 443 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 C8GP07360 202 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 COX7A2P14406 83 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 TGFBR2P37173 567 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 CSNK1DP48730 415 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 WNT3P56703 355 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 DDX39BQ13838 428 aaKnown RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 CDKL4Q5MAI5 379 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 ELMOD1Q8N336 334 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 POP5Q969H6 163 aaKnown RBP15.97■□□□□ 0.15
LIG1-206ENST00000594067 TBC1D20Q96BZ9 403 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 TPD52L3Q96J77 140 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 DACH2Q96NX9 599 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 APOL4Q9BPW4 351 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 SP140LQ9H930 580 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 CPNE5Q9HCH3 593 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 KRT84Q9NSB2 600 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 SIRT5Q9NXA8 310 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 TMPRSS11EQ9UL52 423 aa15.97■□□□□ 0.15
LIG1-206ENST00000594067 A8MU76 341 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 MAGEB17A8MXT2 336 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 YY2O15391 372 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 RGS10O43665 173 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SH3BGRLO75368 114 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 TRPC1P48995 793 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 MTAPQ13126 283 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 MAD2L1BPQ15013 274 aaPredicted RBP15.96■□□□□ 0.15
LIG1-206ENST00000594067 CCDC71Q8IV32 467 aaPredicted RBP15.96■□□□□ 0.15
LIG1-206ENST00000594067 LYSMD2Q8IV50 215 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 BBS7Q8IWZ6 715 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 TCAIMQ8N3R3 496 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 VOPP1Q96AW1 172 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SCRN2Q96FV2 425 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 C19orf43Q9BQ61 176 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 RPS6KA6Q9UK32 745 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 NDRG4Q9ULP0 352 aaKnown RBP15.96■□□□□ 0.15
LIG1-206ENST00000594067 ERVW-1Q9UQF0 538 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SCN2BO60939 215 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 UPK1BO75841 260 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SEMG1P04279 462 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 CD36P16671 472 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 PRPS1L1P21108 318 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SERPINB1P30740 379 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 HNRNPFP52597 415 aaKnown RBP15.96■□□□□ 0.15
LIG1-206ENST00000594067 CYP4F8P98187 520 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 PLEKHG6Q3KR16 790 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 SVOPQ8N4V2 548 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 AUTS2Q8WXX7 1259 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 MTERF1Q99551 399 aaKnown RBP15.96■□□□□ 0.15
LIG1-206ENST00000594067 SIAEQ9HAT2 523 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 ABCB10Q9NRK6 738 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 ABCB8Q9NUT2 735 aa15.96■□□□□ 0.15
LIG1-206ENST00000594067 A0A1W2PQ67 120 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 CLDN24A6NM45 220 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 LCKP06239 509 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 NUDT7P0C024 238 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 KRT20P35900 424 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 MVKQ03426 396 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 FADDQ13158 208 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 TTC23LQ6PF05 361 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 CBLL1Q75N03 491 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 EIF3MQ7L2H7 374 aaKnown RBP15.95■□□□□ 0.14
LIG1-206ENST00000594067 PLD3Q8IV08 490 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 MCFD2Q8NI22 146 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 CSGALNACT1Q8TDX6 532 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 HTRA1Q92743 480 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 ZHX1-C8orf76Q96EF9 292 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 LYSMD1Q96S90 227 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 BTBD3Q9Y2F9 522 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 OR2A25A4D2G3 310 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 NUAK1O60285 661 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 C1SP09871 688 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 SRCP12931 536 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 GPX2P18283 190 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 CD22P20273 847 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 RCVRNP35243 200 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 GJA8P48165 433 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 PCYT1AP49585 367 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 HNMTP50135 292 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 IRF8Q02556 426 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 SF3B4Q15427 424 aaKnown RBP eCLIP15.95■□□□□ 0.141e-7■■■■■ 41.2
LIG1-206ENST00000594067 CARTPTQ16568 116 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 LHX8Q68G74 356 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 MSANTD1Q6ZTZ1 278 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 USP45Q70EL2 814 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 KIAA1958Q8N8K9 716 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 SIGLEC11Q96RL6 698 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 TSEN34Q9BSV6 310 aaKnown RBP15.95■□□□□ 0.14
LIG1-206ENST00000594067 REEP1Q9H902 201 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 PRM3Q9NNZ6 103 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 THUMPD1Q9NXG2 353 aaKnown RBP15.95■□□□□ 0.14
LIG1-206ENST00000594067 KLHL42Q9P2K6 505 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 ANAPC1Q9H1A4 1944 aa15.95■□□□□ 0.14
LIG1-206ENST00000594067 ISPDA4D126 451 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 EFCAB9A8MZ26 197 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 LAMP1P11279 417 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 JUPP14923 745 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 CYP2A7P20853 494 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 PPP3CCP48454 512 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms