RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 APMAPQ9HDC9 416 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 MKS1Q9NXB0 559 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 FOXJ2Q9P0K8 574 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 ACACBO00763 2458 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 A0A1W2PPV9 198 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 WDR91A4D1P6 747 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 E7ENX8 843 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 TAF4O00268 1085 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 CCDC166P0CW27 439 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 TAP2Q03519 686 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 RCN2Q14257 317 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 CMC1Q7Z7K0 106 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 C19orf47Q8N9M1 422 aaKnown RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 TCTN2Q96GX1 697 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 C7orf26Q96N11 449 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 IKZF3Q9UKT9 509 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 ACSL6Q9UKU0 697 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 HMX2A2RU54 273 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 CDC7O00311 574 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 FCHO1O14526 889 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 CD82P27701 267 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 IMPA1P29218 277 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 SERPINB9P50453 376 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 AP1S2P56377 157 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 TSTA3Q13630 321 aaPredicted RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 TBCCQ15814 346 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 THEMIS2Q5TEJ8 643 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 SUSD1Q6UWL2 747 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 SBSNQ6UWP8 590 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 NET1Q7Z628 596 aaPredicted RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 BPHLQ86WA6 291 aaPredicted RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 FAM20CQ8IXL6 584 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 OR2A1Q8NGT9 310 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 RAB3IL1Q8TBN0 382 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 CHRNA10Q9GZZ6 450 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 FGF21Q9NSA1 209 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 INTS7Q9NVH2 962 aaKnown RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 ARL15Q9NXU5 204 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 STOX2Q9P2F5 926 aaPredicted RBP18.86■□□□□ 0.61
LSM4-203ENST00000593829 RAXQ9Y2V3 346 aa18.86■□□□□ 0.61
LSM4-203ENST00000593829 IGF2RP11717 2491 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 NPEPPSL1A6NEC2 478 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 CAPN14A8MX76 684 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 FGF5P12034 268 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 PSMB5P28074 263 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 ADAMTSL2Q86TH1 951 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 ZNF248Q8NDW4 579 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 UBXN10Q96LJ8 280 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 ZNF184Q99676 751 aaPredicted RBP18.85■□□□□ 0.61
LSM4-203ENST00000593829 ZNF180Q9UJW8 692 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 RARRES3Q9UL19 164 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 ZMIZ1Q9ULJ6 1067 aa18.85■□□□□ 0.61
LSM4-203ENST00000593829 MSL3P1P0C860 447 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 SLC35E2BP0CK96 405 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 MAGP20916 626 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 PGM1P36871 562 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 SERPINB4P48594 390 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ATP6V0D1P61421 351 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 GPR19Q15760 415 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ZIC1Q15915 447 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 TRMT5Q32P41 509 aaKnown RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 MBOAT1Q6ZNC8 495 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 PPP1R3BQ86XI6 285 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 LRRC56Q8IYG6 542 aaPredicted RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 SPATA6LQ8N4H0 392 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 OR2L3Q8NG85 312 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 WDR60Q8WVS4 1066 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ACAT2Q9BWD1 397 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 FANCEQ9HB96 536 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ADAMTS20P59510 1910 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 TPRP12270 2363 aaKnown RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 KRT38O76015 456 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 MYL2P10916 166 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 CNTFP26441 200 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 SLC26A3P40879 764 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 TSNQ15631 228 aaKnown RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 PPP1R3AQ16821 1122 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.84■□□□□ 0.61
LSM4-203ENST00000593829 KIAA1614Q5VZ46 1190 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 AGTRAPQ6RW13 159 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 CDHR3Q6ZTQ4 885 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 OR8K5Q8NH50 307 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ZUFSPQ96AP4 578 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 UNKQ9C0B0 810 aaKnown RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 SNX15Q9NRS6 342 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 UTP6Q9NYH9 597 aaKnown RBP18.84■□□□□ 0.61
LSM4-203ENST00000593829 KLHL20Q9Y2M5 609 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 ACOT9Q9Y305 439 aa18.84■□□□□ 0.61
LSM4-203ENST00000593829 RRP8O43159 456 aaKnown RBP18.83■□□□□ 0.6
LSM4-203ENST00000593829 GUCA1CO95843 209 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 CD1DP15813 335 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 TYK2P29597 1187 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 CMPK1P30085 196 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 EIF2S3P41091 472 aaKnown RBP18.83■□□□□ 0.6
LSM4-203ENST00000593829 SERPINB8P50452 374 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 CSHL1Q14406 222 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 DNAL1Q4LDG9 190 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 FRA10AC1Q70Z53 315 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 ZFAND4Q86XD8 727 aa18.83■□□□□ 0.6
LSM4-203ENST00000593829 ATL1Q8WXF7 558 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms