RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LCMT2O60294 686 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 CDH1P12830 882 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 GP5P40197 560 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 GARNL3Q5VVW2 1013 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 CAPN13Q6MZZ7 669 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 ATG14Q6ZNE5 492 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 ASB18Q6ZVZ8 466 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 NOA1Q8NC60 698 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 ABHD11Q8NFV4 315 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 ATL1Q8WXF7 558 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 COL26A1Q96A83 441 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 HAUS8Q9BT25 410 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 SLC25A23Q9BV35 468 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 GPAMQ9HCL2 828 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 P4HTMQ9NXG6 502 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 TNRC6AQ8NDV7 1962 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 IGLV3-12A0A075B6K2 115 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 FEZF1A0PJY2 475 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 MASP2O00187 686 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 TXNDC9O14530 226 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 FAM155BO75949 473 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 STATHP02808 62 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 MMP11P24347 488 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 RRADP55042 308 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 RPS15AP62244 130 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 USP10Q14694 798 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 TSNQ15631 228 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 DCAF10Q5QP82 559 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 SHISA6Q6ZSJ9 500 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 FDCSPQ8NFU4 85 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 FBF1Q8TES7 1133 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 NACC2Q96BF6 587 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 TM4SF19Q96DZ7 209 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 MVB12AQ96EY5 273 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 DERL2Q9GZP9 239 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 SOX17Q9H6I2 414 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 DMGDHQ9UI17 866 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 ANAPC2Q9UJX6 822 aa17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 NXT1Q9UKK6 140 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 MRPS2Q9Y399 296 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-202ENST00000593764 PYCARD-AS1I3L0S3 204 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 SOCS6O14544 535 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 TUBB4AP04350 444 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 ZGLP1P0C6A0 271 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC26A3P40879 764 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 BCL6P41182 706 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC12A2P55011 1212 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 CDKL1Q00532 357 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 FAM53BQ14153 422 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 GRTP1Q5TC63 336 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 CTAGE3PQ8IX95 158 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 SPATA6LQ8N4H0 392 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 PPM1NQ8N819 430 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 AMER3Q8N944 861 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 STT3BQ8TCJ2 826 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 THAP11Q96EK4 314 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 MACROD1Q9BQ69 325 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 NUDT9Q9BW91 350 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 UNKQ9C0B0 810 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 TXNDC16Q9P2K2 825 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 CTNNAL1Q9UBT7 734 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 ZNF282Q9UDV7 671 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 CDC14AQ9UNH5 594 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 OARD1Q9Y530 152 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 HS3ST3B1Q9Y662 390 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 TENM4Q6N022 2769 aa17.58■□□□□ 0.4
SHKBP1-202ENST00000593764 NBASA2RRP1 2371 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 A0A0A6YYC8 382 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 PABPN1LA6NDY0 278 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 A6NL46 340 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 I3L1I5 382 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 AGPSO00116 658 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 PEX12O00623 359 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 PHGDHO43175 533 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 FBLP22087 321 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 CASRP41180 1078 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 PGDP52209 483 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 KLC1Q07866 573 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 KLRB1Q12918 225 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 DSG2Q14126 1118 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 ZKSCAN8Q15776 578 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 VWA2Q5GFL6 755 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 COLEC12Q5KU26 742 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 CATSPEREQ5SY80 951 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 KIRREL2Q6UWL6 708 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 ADAMTSL2Q86TH1 951 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 LAPTM4BQ86VI4 370 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 NEIL2Q969S2 332 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 TSPAN17Q96FV3 270 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 UBXN10Q96LJ8 280 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 FER1L6-AS2Q96M78 137 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 MESP1Q9BRJ9 268 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 SARGQ9BW04 601 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 TRIM4Q9C037 500 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 DRC3Q9H069 523 aa17.57■□□□□ 0.4
SHKBP1-202ENST00000593764 FFAR3O14843 346 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 GPR42O15529 346 aa17.56■□□□□ 0.4
SHKBP1-202ENST00000593764 ANXA5P08758 320 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms