RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CAV1Q03135 178 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 KLC1Q07866 573 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 MYBPC3Q14896 1274 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 IGFBP7Q16270 282 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 RBBP7Q16576 425 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 NADK2Q4G0N4 442 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 DUPD1Q68J44 220 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 KIRREL2Q6UWL6 708 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 LCTLQ6UWM7 567 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 NKAPQ8N5F7 415 aaKnown RBP14.53□□□□□ -0.08
TRIM28-203ENST00000593582 CDKL2Q92772 493 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 THAP11Q96EK4 314 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 HAUS8Q9BT25 410 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 RHOJQ9H4E5 214 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 C5AR2Q9P296 337 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 TXNDC16Q9P2K2 825 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 TRPC4Q9UBN4 977 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 C3orf18Q9UK00 162 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 HS3ST3B1Q9Y662 390 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 PCM1Q15154 2024 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 MED13Q9UHV7 2174 aa14.52□□□□□ -0.08
TRIM28-203ENST00000593582 IGLV3-12A0A075B6K2 115 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 P2RX6O15547 441 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 IPO13O94829 963 aaKnown RBP14.52□□□□□ -0.09
TRIM28-203ENST00000593582 GUCA1CO95843 209 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 CDH1P12830 882 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 NPPBP16860 134 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 SSTR1P30872 391 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 SLC26A3P40879 764 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 AVPR1BP47901 424 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 SOX8P57073 446 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 CSNK1G2P78368 415 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 FAM53BQ14153 422 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 TUBB8Q3ZCM7 444 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 VWA2Q5GFL6 755 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 IRAK1BP1Q5VVH5 260 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 PRSS58Q8IYP2 241 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 ARHGEF39Q8N4T4 335 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 ANKRD7Q92527 254 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 PYCR2Q96C36 320 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 FBXL8Q96CD0 374 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 FAM129AQ9BZQ8 928 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 GRHL1Q9NZI5 618 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 NOVA2Q9UNW9 492 aaKnown RBP14.52□□□□□ -0.09
TRIM28-203ENST00000593582 SH2B3Q9UQQ2 575 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 MAP4K5Q9Y4K4 846 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 PCSK5Q92824 1860 aa14.52□□□□□ -0.09
TRIM28-203ENST00000593582 A0A0A6YYC8 382 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 FEZF1A0PJY2 475 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 I3L1I5 382 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 MASP2O00187 686 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 FOXS1O43638 330 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ACPPP15309 386 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ITGA3P26006 1051 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 CCR8P51685 355 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 SLC12A2P55011 1212 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 PLTPP55058 493 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 TAS2R39P59534 338 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 JMJD6Q6NYC1 403 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 SBSNQ6UWP8 590 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 TMEM207Q6UWW9 146 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 C3orf62Q6ZUJ4 267 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ZNF572Q7Z3I7 529 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 VN1R4Q7Z5H5 301 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ATCAYQ86WG3 371 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 EFCAB3Q8N7B9 438 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 AMER3Q8N944 861 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 CAMKVQ8NCB2 501 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 OR11G2Q8NGC1 345 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 OR56A3Q8NH54 315 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 TM9SF4Q92544 642 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 MIB2Q96AX9 1013 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 MFRPQ9BY79 579 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ZNF552Q9H707 407 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 GPAMQ9HCL2 828 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 MKKSQ9NPJ1 570 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 SLAMF7Q9NQ25 335 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 C14orf105Q9NVL8 296 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 PLAAQ9Y263 795 aa14.51□□□□□ -0.09
TRIM28-203ENST00000593582 ASH1LQ9NR48 2969 aaKnown RBP14.51□□□□□ -0.09
TRIM28-203ENST00000593582 TCRBV9S1A1TA0A576 114 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 IDSB3KWA1 339 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 MAP2K7O14733 419 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 PIAS1O75925 651 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 STATHP02808 62 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 BCL6P41182 706 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 POU4F1Q01851 419 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 CKAP4Q07065 602 aaKnown RBP14.5□□□□□ -0.09
TRIM28-203ENST00000593582 ZNF460Q14592 562 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 PPP1R3AQ16821 1122 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 ZXDCQ2QGD7 858 aaPredicted RBP14.5□□□□□ -0.09
TRIM28-203ENST00000593582 CYS1Q717R9 158 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 ASPGQ86U10 573 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 LAPTM4BQ86VI4 370 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 CCDC25Q86WR0 208 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 TBC1D19Q8N5T2 526 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 RBMXL3Q8N7X1 1067 aaKnown RBP14.5□□□□□ -0.09
TRIM28-203ENST00000593582 ABHD11Q8NFV4 315 aa14.5□□□□□ -0.09
TRIM28-203ENST00000593582 CPT1CQ8TCG5 803 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms