RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PSD3Q9NYI0 1048 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 MRPL15Q9P015 296 aaKnown RBP4.63□□□□□ -1.67
SMAD4-216ENST00000593223 RCC2Q9P258 522 aaKnown RBP4.63□□□□□ -1.67
SMAD4-216ENST00000593223 C5AR2Q9P296 337 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 TEKT2Q9UIF3 430 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 TSPYL4Q9UJ04 414 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 WDR37Q9Y2I8 494 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 TMEM184BQ9Y519 407 aaPredicted RBP4.63□□□□□ -1.67
SMAD4-216ENST00000593223 TTC21BQ7Z4L5 1316 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 C4BP0C0L5 1744 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 NSD3Q9BZ95 1437 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 ANKRD50Q9ULJ7 1429 aa4.63□□□□□ -1.67
SMAD4-216ENST00000593223 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 A0A0B4J293 547 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 LRRD1A4D1F6 860 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 TMEM8BA6NDV4 472 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CDRT15L2A8MXV6 281 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 O00370 1275 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SYNGR3O43761 229 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CELF2O95319 508 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 IGKV3-20P01619 116 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 UMODP07911 640 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 GM2AP17900 193 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 MARK3P27448 753 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CAPZA2P47755 286 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 MRPS5P82675 430 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 BEX3Q00994 111 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 RUNX1T1Q06455 604 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 GAGE5Q13069 117 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 GAGE6Q13070 117 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SNX1Q13596 522 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 IMMTQ16891 758 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 C15orf59Q2T9L4 293 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 KRT71Q3SY84 523 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 RAB41Q5JT25 222 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 C12orf60Q5U649 245 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 DENND5BQ6ZUT9 1274 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 Q75L30 129 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 INTS8Q75QN2 995 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 MTERF4Q7Z6M4 381 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 LONP2Q86WA8 852 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 LRRC49Q8IUZ0 686 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 DCUN1D3Q8IWE4 304 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 TUSC5Q8IXB3 177 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 PEX5LQ8IYB4 626 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 DCLK2Q8N568 766 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SPERTQ8NA61 448 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CNNM3Q8NE01 707 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 OR6C4Q8NGE1 309 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 OR56B2PQ8NGI1 322 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SETD6Q8TBK2 473 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CCDC110Q8TBZ0 833 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 RNF139Q8WU17 664 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SLC5A11Q8WWX8 675 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SEPT1Q8WYJ6 367 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CASP10Q92851 521 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 PDLIM5Q96HC4 596 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CNOT6LQ96LI5 555 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 GFI1Q99684 422 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 APOL6Q9BWW8 343 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 ACPTQ9BZG2 426 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 NYXQ9GZU5 481 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 HSD3B7Q9H2F3 369 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF334Q9HCZ1 680 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CHTOPQ9Y3Y2 248 aaKnown RBP4.62□□□□□ -1.67
SMAD4-216ENST00000593223 YIPF1Q9Y548 306 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 PCDHGA5Q9Y5G8 931 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 C4AP0C0L4 1744 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 MROH5Q6ZUA9 1318 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 RGPD5Q99666 1765 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 EYSQ5T1H1 3165 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 SCN4AP35499 1836 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 TAF1LQ8IZX4 1826 aa4.62□□□□□ -1.67
SMAD4-216ENST00000593223 CENPFP49454 3210 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 PPLO60437 1756 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SCN11AQ9UI33 1791 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 A0A1W2PQ09 198 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 LRRIQ4A6NIV6 560 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 PLK4O00444 970 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 CTDSP2O14595 271 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF263O14978 683 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 MAGEB3O15480 346 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 LINC01565O15544 149 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 GRID2O43424 1007 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SPOPO43791 374 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 MITFO75030 526 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 RSL1D1O76021 490 aaKnown RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 YEATS4O95619 227 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 MYBL1P10243 752 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 CSF2RAP15509 400 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 RFC4P35249 363 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 MAGEA8P43361 318 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 SLC15A1P46059 708 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 LUMP51884 338 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-216ENST00000593223 ACTR1AP61163 376 aa4.61□□□□□ -1.67
SMAD4-216ENST00000593223 RPL24P83731 157 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms