RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CAAP1Q9H8G2 361 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 PELI2Q9HAT8 420 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 TAC3Q9UHF0 121 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 ZNF490Q9ULM2 529 aaPredicted RBP12.97□□□□□ -0.33
VMP1-217ENST00000593168 CCL27Q9Y4X3 112 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 PCDHGA11Q9Y5H2 935 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 PTGDR2Q9Y5Y4 395 aa12.97□□□□□ -0.33
VMP1-217ENST00000593168 TDRD6O60522 2096 aaKnown RBP12.97□□□□□ -0.33
VMP1-217ENST00000593168 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 A0A1B0GVT2 93 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 LMO7DNF2Z398 122 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 UBDO15205 165 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 RGS14O43566 566 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 HSD3B1P14060 373 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 CXCR2P25025 360 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 HSD3B2P26439 372 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 VARSP26640 1264 aaKnown RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 CTSKP43235 329 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 RXRGP48443 463 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 ATP4BP51164 291 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 ABATP80404 500 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 PRDX1Q06830 199 aaKnown RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 HIST2H2ACQ16777 129 aaPredicted RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 CATSPEREQ5SY80 951 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 ICE2Q659A1 982 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 TMEM198Q66K66 360 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 HIST2H2AA3Q6FI13 130 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 MED27Q6P2C8 311 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 SPATA19Q7Z5L4 167 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 SLC9B2Q86UD5 537 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 C17orf64Q86WR6 236 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 LAS2Q8IYD9 372 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 ZNF548Q8NEK5 533 aaPredicted RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 OR2A1Q8NGT9 310 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 UBE2E3Q969T4 207 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 REPS1Q96D71 796 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 PPP3R2Q96LZ3 170 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 NRTNQ99748 197 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 XKR8Q9H6D3 395 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 IL21RQ9HBE5 538 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.33
VMP1-217ENST00000593168 ARMCX1Q9P291 453 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 SH2B3Q9UQQ2 575 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 RAXQ9Y2V3 346 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 TSC22D4Q9Y3Q8 395 aa12.96□□□□□ -0.33
VMP1-217ENST00000593168 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.34
VMP1-217ENST00000593168 TMEM131Q92545 1883 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 YY2O15391 372 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 AQP9O43315 295 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 PEX11AO75192 247 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 PIAS2O75928 621 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 CCNDBP1O95273 360 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 PDYNP01213 254 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 PRPH2P23942 346 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 MRPL19P49406 292 aaKnown RBP12.95□□□□□ -0.34
VMP1-217ENST00000593168 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
VMP1-217ENST00000593168 KLF10Q13118 480 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 UBAP2LQ14157 1087 aaKnown RBP12.95□□□□□ -0.34
VMP1-217ENST00000593168 SQLEQ14534 574 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 KIF19Q2TAC6 998 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 ATP6AP1LQ52LC2 224 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 SGO1Q5FBB7 561 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 C6orf136Q5SQH8 315 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 OGFOD3Q6PK18 319 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 GLRX5Q86SX6 157 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 FAM129CQ86XR2 697 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 TREML1Q86YW5 311 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 KRT78Q8N1N4 520 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 OR7G3Q8NG95 312 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 OR4E2Q8NGC2 313 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 OR4K1Q8NGD4 311 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 NSL1Q96IY1 281 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
VMP1-217ENST00000593168 SRMSQ9H3Y6 488 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 NT5DC2Q9H857 520 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 FARSBQ9NSD9 589 aaKnown RBP12.95□□□□□ -0.34
VMP1-217ENST00000593168 TXLNGQ9NUQ3 528 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 CSNK1G3Q9Y6M4 447 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
VMP1-217ENST00000593168 LSM1O15116 133 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 HNRNPCL1O60812 293 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 RSL1D1O76021 490 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 ZIC2O95409 532 aaPredicted RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 ANXA6P08133 673 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 CHRM5P08912 532 aaPredicted RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 T-ENOLP0DO92 83 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 CDH1P12830 882 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 HRH2P25021 359 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 PRDX6P30041 224 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 FASLGP48023 281 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms