RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 AMER3Q8N944 861 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 Q8NA96 180 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 MVB12AQ96EY5 273 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 MMABQ96EY8 250 aaPredicted RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 SGPP1Q9BX95 441 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 PCBD2Q9H0N5 130 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 SMYD2Q9NRG4 433 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 MOCS1Q9NZB8 636 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 C5AR2Q9P296 337 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 TRPC4Q9UBN4 977 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 CDC14AQ9UNH5 594 aa13.2□□□□□ -0.3
APOC1-208ENST00000592535 MRPS2Q9Y399 296 aaKnown RBP13.2□□□□□ -0.3
APOC1-208ENST00000592535 FAM95CA0A1B0GW59 222 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 NDC80O14777 642 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 PRPF4O43172 522 aaKnown RBP eCLIP13.19□□□□□ -0.31e-8■■■■■ 28.4
APOC1-208ENST00000592535 PIAS1O75925 651 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 CCND1P24385 295 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 HRH2P25021 359 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 ITGA3P26006 1051 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 SLC26A3P40879 764 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 ETF1P62495 437 aaKnown RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 SYT16Q17RD7 645 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 PRR30Q53SZ7 412 aaPredicted RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 LAPTM4BQ86VI4 370 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 C17orf64Q86WR6 236 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 OR11G2Q8NGC1 345 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 CPT1CQ8TCG5 803 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 PNPLA2Q96AD5 504 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 PYCR2Q96C36 320 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 MACROD1Q9BQ69 325 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 YIPF2Q9BWQ6 316 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 DRC3Q9H069 523 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 ARL15Q9NXU5 204 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 WHRNQ9P202 907 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
APOC1-208ENST00000592535 UBR5O95071 2799 aaPredicted RBP13.19□□□□□ -0.3
APOC1-208ENST00000592535 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 FEZF1A0PJY2 475 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 PABPN1LA6NDY0 278 aaKnown RBP13.18□□□□□ -0.3
APOC1-208ENST00000592535 GUCA1CO95843 209 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 ALPPP05187 535 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 ANXA5P08758 320 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 CDH1P12830 882 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 NPPBP16860 134 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 SSTR1P30872 391 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 BCL6P41182 706 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 AP1S2P56377 157 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 TAS2R39P59534 338 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 MAT1AQ00266 395 aaKnown RBP13.18□□□□□ -0.3
APOC1-208ENST00000592535 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 FAM53BQ14153 422 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 ZNF460Q14592 562 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 NDUFA9Q16795 377 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 DUPD1Q68J44 220 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 CAPN13Q6MZZ7 669 aaPredicted RBP13.18□□□□□ -0.3
APOC1-208ENST00000592535 SBSNQ6UWP8 590 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 ATCAYQ86WG3 371 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 EFCAB3Q8N7B9 438 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 OR56A3Q8NH54 315 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 FBXL8Q96CD0 374 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 PDLIM5Q96HC4 596 aaKnown RBP13.18□□□□□ -0.3
APOC1-208ENST00000592535 TRIM54Q9BYV2 358 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 ZBTB20Q9HC78 741 aaPredicted RBP13.18□□□□□ -0.3
APOC1-208ENST00000592535 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 SLAMF7Q9NQ25 335 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 MAP4K5Q9Y4K4 846 aa13.18□□□□□ -0.3
APOC1-208ENST00000592535 NPEPPSL1A6NEC2 478 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 IDSB3KWA1 339 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 CDC7O00311 574 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 MAP2K7O14733 419 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
APOC1-208ENST00000592535 KLHL41O60662 606 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
APOC1-208ENST00000592535 ENO2P09104 434 aaPredicted RBP13.17□□□□□ -0.3
APOC1-208ENST00000592535 ACPPP15309 386 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 EMP2P54851 167 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 MEF2AQ02078 507 aaPredicted RBP13.17□□□□□ -0.3
APOC1-208ENST00000592535 Q0VFX4 171 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
APOC1-208ENST00000592535 PPP1R3AQ16821 1122 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 PRSS41Q7RTY9 318 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 CEP97Q8IW35 865 aa13.17□□□□□ -0.3
APOC1-208ENST00000592535 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms