RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FBXO48Q5FWF7 155 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PAGE2BQ5JRK9 111 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 HIST2H2AA3Q6FI13 130 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 GTF2H2CQ6P1K8 395 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 SLCO4C1Q6ZQN7 724 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 RNF44Q7L0R7 432 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 KRT78Q8N1N4 520 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 ARMC2Q8NEN0 867 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 ATP6V1E2Q96A05 226 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 RERGQ96A58 199 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PTCD3Q96EY7 689 aaKnown RBP18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PRR11Q96HE9 360 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-220ENST00000588917 MAGEB10Q96LZ2 347 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-220ENST00000588917 FAM111AQ96PZ2 611 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 EFCAB11Q9BUY7 163 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 SARGQ9BW04 601 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 IPPKQ9H8X2 491 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 OXSMQ9NWU1 459 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PILRAQ9UKJ1 303 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PCDHGA7Q9Y5G6 932 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 AP1M2Q9Y6Q5 423 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 BAHCC1Q9P281 2608 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 TRBC2A0A5B9 178 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 TMEM150CB9EJG8 249 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 E2F3O00716 465 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 UGDHO60701 494 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 PRAMEF10O60809 474 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 SIX3O95343 332 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-220ENST00000588917 CREB1P16220 341 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 GSTM2P28161 218 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 GABRA4P48169 554 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 SLC18A1P54219 525 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 ITGA1P56199 1179 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 ERVPABLB-1P60509 514 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 MAGOHP61326 146 aaKnown RBP18.75■□□□□ 0.59
CIRBP-220ENST00000588917 GPR19Q15760 415 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 XKR6Q5GH73 641 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 ZNF678Q5SXM1 525 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 CATSPEREQ5SY80 951 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 LIPJQ5W064 366 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 TLDC1Q6P9B6 456 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 TMPRSS11BQ86T26 416 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 ZNF655Q8N720 491 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-220ENST00000588917 MDM1Q8TC05 714 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 USP7Q93009 1102 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 UBE2E3Q969T4 207 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 TLCD1Q96CP7 247 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 L3HYPDHQ96EM0 354 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 WDR34Q96EX3 536 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 SEC16BQ96JE7 1060 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 SH3GL2Q99962 352 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 SELENOSQ9BQE4 189 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 NLNQ9BYT8 704 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 NT5DC2Q9H857 520 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 ENAMQ9NRM1 1142 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 THSD1Q9NS62 852 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 STK38LQ9Y2H1 464 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 PTPRBP23467 1997 aa18.75■□□□□ 0.59
CIRBP-220ENST00000588917 A0A0J9YVX5 310 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 A0A1W2PNU3 283 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-220ENST00000588917 E7EQ34 232 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 TRIM13O60858 407 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 CTSVO60911 334 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 OR2B3O76000 313 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 SUPT7LO94864 414 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 HBQ1P09105 142 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 CD82P27701 267 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 ETV5P41161 510 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 HNF4AP41235 474 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 CHIT1Q13231 466 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 FAM214AQ32MH5 1076 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 MANEAQ5SRI9 462 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 LIPMQ5VYY2 423 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 C19orf48Q6RUI8 117 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 GOLGA7Q7Z5G4 137 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 TTLQ8NG68 377 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 ZBTB9Q96C00 473 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 ATP6V1G3Q96LB4 118 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 ZNF578Q96N58 590 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-220ENST00000588917 OR2A5Q96R48 311 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 IRAK4Q9NWZ3 460 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 PCTPQ9UKL6 214 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 SH2B3Q9UQQ2 575 aa18.74■□□□□ 0.59
CIRBP-220ENST00000588917 HMGB1P1B2RPK0 211 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-220ENST00000588917 H3BQF6 201 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 HAT1O14929 419 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 OR1F1O43749 312 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 WFS1O76024 890 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 MLYCDO95822 493 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 RPS17P08708 135 aaKnown RBP18.73■□□□□ 0.59
CIRBP-220ENST00000588917 AHRP35869 848 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 ARSFP54793 590 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 DOC2AQ14183 400 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 E2F2Q14209 437 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 CFAP157Q5JU67 520 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 YOD1Q5VVQ6 348 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-220ENST00000588917 TMIGD1Q6UXZ0 262 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 HOMEZQ8IX15 550 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 TRPV3Q8NET8 790 aa18.73■□□□□ 0.59
CIRBP-220ENST00000588917 ZNF483Q8TF39 744 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms