RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 FBXO42Q6P3S6 717 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 TMIGD1Q6UXZ0 262 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 ATG14Q6ZNE5 492 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 RBM44Q6ZP01 1051 aaKnown RBP13.55□□□□□ -0.24
CCDC130-208ENST00000588071 TMPRSS9Q7Z410 1059 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PRSS42Q7Z5A4 293 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PAQR7Q86WK9 346 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 HOMEZQ8IX15 550 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 MTFMTQ96DP5 389 aaKnown RBP13.55□□□□□ -0.24
CCDC130-208ENST00000588071 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 KCNA7Q96RP8 456 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PITHD1Q9GZP4 211 aaPredicted RBP13.55□□□□□ -0.24
CCDC130-208ENST00000588071 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 NT5DC2Q9H857 520 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PDE7BQ9NP56 450 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 SLCO1B3Q9NPD5 702 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PNPOQ9NVS9 261 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 ADAM21Q9UKJ8 722 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
CCDC130-208ENST00000588071 PCDHGA11Q9Y5H2 935 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 KLK4Q9Y5K2 254 aa13.55□□□□□ -0.24
CCDC130-208ENST00000588071 FAM186AA6NE01 2351 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 VPS13AQ96RL7 3174 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SPAARA0A1B0GVQ0 90 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 TRBC2A0A5B9 178 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 OR2A25A4D2G3 310 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 D6RAR5 112 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 H0YIV9 168 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 TM4SF5O14894 197 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 HAT1O14929 419 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 NRP2O60462 931 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 PRAMEF10O60809 474 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 ULK1O75385 1050 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 EZRP15311 586 aaKnown RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 CD22P20273 847 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SERPINB3P29508 390 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 NOVA1P51513 510 aaKnown RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 FOXA1P55317 472 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 HSD11B2P80365 405 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SIM1P81133 766 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 REEP5Q00765 189 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 CYP4F3Q08477 520 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 IFT88Q13099 833 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 E2F2Q14209 437 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 ZIC1Q15915 447 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 ZC3H12BQ5HYM0 836 aaKnown RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 ZNF740Q8NDX6 193 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SELENOMQ8WWX9 145 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 CCT6BQ92526 530 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 CCDC74BQ96LY2 380 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 TMEM74Q96NL1 305 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
CCDC130-208ENST00000588071 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-208ENST00000588071 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 TMX2-CTNND1H3BSU7 103 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 AGRPO00253 132 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 MANBAO00462 879 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 LCMT2O60294 686 aaKnown RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 SERPIND1P05546 499 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 FTH1P19P0C7X4 201 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 THRAP10827 490 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 SDHBP21912 280 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 LSP1P33241 339 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 INHBCP55103 352 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 PHEXP78562 749 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 INSM1Q01101 510 aaPredicted RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 RELAQ04206 551 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 DDX39BQ13838 428 aaKnown RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 RSPO4Q2I0M5 234 aaPredicted RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 KANK2Q63ZY3 851 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 DHRS13Q6UX07 377 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 ARHGAP22Q7Z5H3 698 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 LAS2Q8IYD9 372 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 MFSD9Q8NBP5 474 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 TTLQ8NG68 377 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 OR7G3Q8NG95 312 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 PIWIL2Q8TC59 973 aaKnown RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 N4BP2L2Q92802 583 aaPredicted RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 RERGQ96A58 199 aaPredicted RBP13.53□□□□□ -0.24
CCDC130-208ENST00000588071 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
CCDC130-208ENST00000588071 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms