RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 SUN3Q8TAQ9 357 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 NSUN5Q96P11 429 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 TGM7Q96PF1 710 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 MCOLN1Q9GZU1 580 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 POLR2J3Q9H1A7 115 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 MRM3Q9HC36 420 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 MYOCOSA0A1B0GUC4 107 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 MUSKO15146 869 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 LATS1O95835 1130 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 SRPRAP08240 638 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 ATP5A1P25705 553 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 ZNF267Q14586 743 aaPredicted RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 PCLAFQ15004 111 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 SLC44A4Q53GD3 710 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 CXorf57Q6NSI4 855 aaKnown RBP9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 TMPRSS11AQ6ZMR5 421 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 LNX2Q8N448 690 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 KCNS3Q9BQ31 491 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 HERPUD2Q9BSE4 406 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 ABCB10Q9NRK6 738 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 GIN1Q9NXP7 522 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 PHF11Q9UIL8 331 aa9.44□□□□□ -0.9
GPATCH8-205ENST00000587228 TLX3O43711 291 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 SEMA4FO95754 770 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 S1PR4O95977 384 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ACRV1P26436 265 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 HOXC12P31275 282 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CASRP41180 1078 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 TCEAL1Q15170 157 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 DEFB134Q4QY38 66 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ZNF311Q5JNZ3 666 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CLEC12AQ5QGZ9 265 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ZNF761Q86XN6 746 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 SLC22A15Q8IZD6 547 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 TMEM74Q96NL1 305 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 C8orf33Q9H7E9 229 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 LMAN1LQ9HAT1 526 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 TRIM39Q9HCM9 518 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 KLRF1Q9NZS2 232 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 P2RX2Q9UBL9 471 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 UBR2Q8IWV8 1755 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 FAM221BA6H8Z2 402 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PLGP00747 810 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 BPIP17213 487 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 NR4A1P22736 598 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 LEPRP48357 1165 aaKnown RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CDKN1CP49918 316 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CLCN4P51793 760 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 DLG1Q12959 904 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ENPP2Q13822 863 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 FAM214AQ32MH5 1076 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 MR1Q95460 341 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 DPH7Q9BTV6 452 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 EBF2Q9HAK2 575 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 Q9N2J8 555 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 BTBD3Q9Y2F9 522 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RGS10O43665 173 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PRKD3O94806 890 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ADRB3P13945 408 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CKMT2P17540 419 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 C5AR1P21730 350 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CXCR1P25024 350 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CAPGP40121 348 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 SPINT3P49223 89 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 DIO3P55073 304 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 SP140Q13342 867 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 EIPR1Q53HC9 387 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CRB2Q5IJ48 1285 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PERM1Q5SV97 790 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ZNF678Q5SXM1 525 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 NCEH1Q6PIU2 408 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RBM44Q6ZP01 1051 aaKnown RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 OXR1Q8N573 874 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RAB8BQ92930 207 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 TPT1P8Q9HAU6 139 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 MCCC2Q9HCC0 563 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PCDHB3Q9Y5E6 796 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RGPD1P0DJD0 1748 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 H0YC42 278 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RFPL1O75677 317 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 ALDOAP04075 364 aaKnown RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 XRCC1P18887 633 aaPredicted RBP9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 RAB14P61106 215 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 CDK6Q00534 326 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 DSC3Q14574 896 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 FAM92BQ6ZTR7 304 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 MYLIPQ8WY64 445 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 PTCHD1Q96NR3 888 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 BOCQ9BWV1 1114 aa9.43□□□□□ -0.9
GPATCH8-205ENST00000587228 MARCH7Q9H992 704 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms