RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 DCAF10Q5QP82 559 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 PRMT9Q6P2P2 845 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 LCTLQ6UWM7 567 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 VN1R4Q7Z5H5 301 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 C17orf64Q86WR6 236 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 STT3BQ8TCJ2 826 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 FBXL8Q96CD0 374 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 IP6K3Q96PC2 410 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 OR4K3Q96R72 315 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 TRIM54Q9BYV2 358 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 GPAMQ9HCL2 828 aa18.13■□□□□ 0.49
TPM4-204ENST00000586499 SPENQ96T58 3664 aaKnown RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 A0A0A6YYC8 382 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 PABPN1LA6NDY0 278 aaKnown RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 FAM159BA6NKW6 160 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 I3L1I5 382 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 FOXS1O43638 330 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 ALOX12BO75342 701 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 ENO2P09104 434 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 FBLP22087 321 aaKnown RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 MMP11P24347 488 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 EMP3P54852 163 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 CAV1Q03135 178 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 CAPN13Q6MZZ7 669 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 SHISA5Q8N114 240 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 SPATA6LQ8N4H0 392 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 NKAPQ8N5F7 415 aaKnown RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 OR56A3Q8NH54 315 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 CDKL2Q92772 493 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 MMABQ96EY8 250 aaPredicted RBP18.12■□□□□ 0.49
TPM4-204ENST00000586499 YIPF2Q9BWQ6 316 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 LRRC4CQ9HCJ2 640 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 HS3ST3B1Q9Y662 390 aa18.12■□□□□ 0.49
TPM4-204ENST00000586499 AGPSO00116 658 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 SOCS6O14544 535 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 FAM155BO75949 473 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 ZGLP1P0C6A0 271 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 CCND1P24385 295 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 HRH2P25021 359 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 BCL6P41182 706 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 RPS15AP62244 130 aaKnown RBP18.11■□□□□ 0.49
TPM4-204ENST00000586499 OCA2Q04671 838 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 KLC1Q07866 573 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 TSNQ15631 228 aaKnown RBP18.11■□□□□ 0.49
TPM4-204ENST00000586499 SYT16Q17RD7 645 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 NADK2Q4G0N4 442 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 C8orf74Q6P047 294 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 CYS1Q717R9 158 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 CTAGE3PQ8IX95 158 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 AMER3Q8N944 861 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 MIEF2Q96C03 454 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 FER1L6-AS2Q96M78 137 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 GPR83Q9NYM4 423 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 TRPC4Q9UBN4 977 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 ZNF282Q9UDV7 671 aaPredicted RBP18.11■□□□□ 0.49
TPM4-204ENST00000586499 CDC14AQ9UNH5 594 aa18.11■□□□□ 0.49
TPM4-204ENST00000586499 KCNE1BA0A087WTH5 132 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 TXNDC9O14530 226 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 PHGDHO43175 533 aaKnown RBP18.1■□□□□ 0.49
TPM4-204ENST00000586499 WISP1O95388 367 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 WISP3O95389 354 aaPredicted RBP18.1■□□□□ 0.49
TPM4-204ENST00000586499 GMPRP36959 345 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 SLC26A3P40879 764 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 SLC12A2P55011 1212 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 DSG2Q14126 1118 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 USP10Q14694 798 aaKnown RBP18.1■□□□□ 0.49
TPM4-204ENST00000586499 IGFBP7Q16270 282 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 WHAMMP3Q1A5X7 153 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 KBTBD12Q3ZCT8 623 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 CATSPEREQ5SY80 951 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 GARNL3Q5VVW2 1013 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 KIRREL2Q6UWL6 708 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 PRSS41Q7RTY9 318 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 GALNT16Q8N428 558 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 CLEC1AQ8NC01 280 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 OR9A4Q8NGU2 314 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 TM4SF19Q96DZ7 209 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 RBBP8Q99708 897 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 CPNE1Q99829 537 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 HAUS8Q9BT25 410 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 CRB3Q9BUF7 120 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 DRC3Q9H069 523 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 TXNDC16Q9P2K2 825 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 CTNNAL1Q9UBT7 734 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 FBXL4Q9UKA2 621 aa18.1■□□□□ 0.49
TPM4-204ENST00000586499 NXT1Q9UKK6 140 aaKnown RBP18.1■□□□□ 0.49
TPM4-204ENST00000586499 NOVA2Q9UNW9 492 aaKnown RBP18.1■□□□□ 0.49
TPM4-204ENST00000586499 IGLV3-12A0A075B6K2 115 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 GSTA2P09210 222 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 GP5P40197 560 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 MLLT10P55197 1068 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 MAT1AQ00266 395 aaKnown RBP18.09■□□□□ 0.49
TPM4-204ENST00000586499 POU4F1Q01851 419 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 GUCY2DQ02846 1103 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 EFTUD2Q15029 972 aaKnown RBP eCLIP18.09■□□□□ 0.491e-7■■■■□ 20.6
TPM4-204ENST00000586499 RBBP7Q16576 425 aa18.09■□□□□ 0.49
TPM4-204ENST00000586499 C18orf21Q32NC0 220 aaPredicted RBP18.09■□□□□ 0.49
TPM4-204ENST00000586499 PPM1NQ8N819 430 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms