RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 LRRC8CQ8TDW0 803 aa16.27■□□□□ 0.2
PRKCSH-203ENST00000586486 KLHL25Q9H0H3 589 aa16.27■□□□□ 0.2
PRKCSH-203ENST00000586486 NT5DC2Q9H857 520 aa16.27■□□□□ 0.2
PRKCSH-203ENST00000586486 PDE7BQ9NP56 450 aa16.27■□□□□ 0.2
PRKCSH-203ENST00000586486 MID1IP1Q9NPA3 183 aa16.27■□□□□ 0.2
PRKCSH-203ENST00000586486 H0YIV9 168 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 HAT1O14929 419 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 MAP3K7O43318 606 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CTSVO60911 334 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 MT-CO3P00414 261 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 MLLT3P42568 568 aaPredicted RBP16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 SLC1A6P48664 564 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 RPS15AP62244 130 aaKnown RBP16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 ISXQ2M1V0 245 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 PHF19Q5T6S3 580 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 HES3Q5TGS1 186 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 ATG14Q6ZNE5 492 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CUZD1Q86UP6 607 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 KRT78Q8N1N4 520 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 TBC1D19Q8N5T2 526 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 DCBLD1Q8N8Z6 715 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 UBE2E3Q969T4 207 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CDK15Q96Q40 435 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 DEPDC7Q96QD5 511 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 ZFYVE21Q9BQ24 234 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 SLC29A3Q9BZD2 475 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 SPNS1Q9H2V7 528 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CCDC134Q9H6E4 229 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 FAM60AQ9NP50 221 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 THAP1Q9NVV9 213 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 SOHLH2Q9NX45 425 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 HAO1Q9UJM8 370 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 RNF11Q9Y3C5 154 aa16.27■□□□□ 0.19
PRKCSH-203ENST00000586486 CNOT1A5YKK6 2376 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 A8MU76 341 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ITM2AO43736 263 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 PRAMEF10O60809 474 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 OR4F21O95013 312 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 HSPA4LO95757 839 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 GSTM2P28161 218 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ARL1P40616 181 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 MDH1P40925 334 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 GABRA4P48169 554 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ARL4DP49703 201 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 SEPHS1P49903 392 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 OCRLQ01968 901 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 MEF2AQ02078 507 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ZC3H12BQ5HYM0 836 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 TMIGD1Q6UXZ0 262 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 HOMEZQ8IX15 550 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 LAS2Q8IYD9 372 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 KIRREL3Q8IZU9 778 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 DNAJC22Q8N4W6 341 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 RCBTB1Q8NDN9 531 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ZNF740Q8NDX6 193 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 ADAMTS14Q8WXS8 1223 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 THAP11Q96EK4 314 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 SEC16BQ96JE7 1060 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 SORT1Q99523 831 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 C20orf27Q9GZN8 174 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 TSC22D4Q9Y3Q8 395 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 PCDHGA11Q9Y5H2 935 aa16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 MDC1Q14676 2089 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-203ENST00000586486 FEZF1A0PJY2 475 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 LYPLA1O75608 230 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 FGF4P08620 206 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 HGFP14210 728 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 SCTRP47872 440 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 GUCY1A3Q02108 690 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 C16orf72Q14CZ0 275 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 HIST2H2ACQ16777 129 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 TMTC4Q5T4D3 741 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 C10orf62Q5T681 223 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 HIST2H2AA3Q6FI13 130 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 MED27Q6P2C8 311 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 FBXO42Q6P3S6 717 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 MYLK4Q86YV6 388 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 AGBL5Q8NDL9 886 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 TTLQ8NG68 377 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 REPS1Q96D71 796 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 LIN37Q96GY3 246 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 OR2A5Q96R48 311 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 STRADBQ9C0K7 418 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 ENAMQ9NRM1 1142 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 SIDT1Q9NXL6 827 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 RAP2CQ9Y3L5 183 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 PCDHGA4Q9Y5G9 962 aa16.25■□□□□ 0.19
PRKCSH-203ENST00000586486 CSO75390 466 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 SERPINB1P30740 379 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 AHRP35869 848 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 BCL6P41182 706 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 ZRSR2Q15696 482 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 CPSF6Q16630 551 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 TMPRSS12Q86WS5 348 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 CDYL2Q8N8U2 506 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 ANKRD53Q8N9V6 530 aa16.24■□□□□ 0.19
PRKCSH-203ENST00000586486 MFSD9Q8NBP5 474 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms