RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PLEKHG6Q3KR16 790 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 NEK10Q6ZWH5 1172 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 USP45Q70EL2 814 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CLECL1Q8IZS7 167 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SYNPOQ8N3V7 929 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 UBE2FQ969M7 185 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LGALS12Q96DT0 336 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 MCCC1Q96RQ3 725 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RASSF1Q9NS23 344 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 KIAA1522Q9P206 1035 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TMPRSS11EQ9UL52 423 aa13.74□□□□□ -0.21
CDK5RAP3-237ENST00000585163 OR2A25A4D2G3 310 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C9P02748 559 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CYP2A7P20853 494 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TGM1P22735 817 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CD70P32970 193 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C21orf58P58505 322 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 FADDQ13158 208 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CAMK2GQ13555 558 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LIPJQ5W064 366 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SNX29P2Q8IUI4 249 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C7orf34Q96L11 122 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ATG10Q9H0Y0 220 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TPT1P8Q9HAU6 139 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ZNF334Q9HCZ1 680 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 VPS29Q9UBQ0 182 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CLDN24A6NM45 220 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 YY2O15391 372 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 UGDHO60701 494 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CPSF4O95639 269 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ALOX5P09917 674 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CD22P20273 847 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TGFBR2P37173 567 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SNRPD1P62314 119 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CREMQ03060 361 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PLEKHS1Q5SXH7 462 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 MPP7Q5T2T1 576 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 WDR20Q8TBZ3 569 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 HRASLS5Q96KN8 279 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 EPYCQ99645 322 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SUV39H2Q9H5I1 410 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TTC34A8MYJ7 566 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PRRG1O14668 218 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LAMP1P11279 417 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SRCP12931 536 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ATP1B2P14415 290 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CRYBA2P53672 197 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CSNK2BP67870 215 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 IRF8Q02556 426 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 UBE2UQ5VVX9 321 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ZDHHC20Q5W0Z9 365 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 AHSA2Q719I0 299 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ENTHD1Q8IYW4 607 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RPL3LQ92901 407 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PSD2Q9BQI7 771 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 GABARAPL3Q9BY60 117 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 EPS8L2Q9H6S3 715 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SPATA6Q9NWH7 488 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RUVBL1Q9Y265 456 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 BTBD3Q9Y2F9 522 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LCKP06239 509 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C1SP09871 688 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CD36P16671 472 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RXRGP48443 463 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 STK19P49842 368 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 KCNJ10P78508 379 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LHX8Q68G74 356 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 TPD52L3Q96J77 140 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SPATA7Q9P0W8 599 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 LSM7Q9UK45 103 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PCDHGA6Q9Y5G7 932 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 KIAA1671Q9BY89 1806 aa13.72□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SOD2P04179 222 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CTSOP43234 321 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SPINT3P49223 89 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CD300CQ08708 224 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 MPPE1Q53F39 396 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SERPINA13PQ6UXR4 307 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RASGRP3Q8IV61 690 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 BBS7Q8IWZ6 715 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CADM3Q8N126 398 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 CPXM2Q8N436 756 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 STARD8Q92502 1023 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 MTERF1Q99551 399 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 DUSP26Q9BV47 211 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms