RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 POLG2Q9UHN1 485 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SUFUQ9UMX1 484 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 SLC22A14Q9Y267 594 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 TSC22D4Q9Y3Q8 395 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 TIMM22Q9Y584 194 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 COPG1Q9Y678 874 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 DGKBQ9Y6T7 804 aa11.53□□□□□ -0.56
GGA3-217ENST00000583667 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
GGA3-217ENST00000583667 PRSS38A1L453 326 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 E7ENX8 843 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 ULK1O75385 1050 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 MT-CO3P00414 261 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 KRT6AP02538 564 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 KRT6BP04259 564 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 SLC35G4P0C7Q5 338 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 GNAZP19086 355 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 PIK3R1P27986 724 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 HMOX2P30519 316 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 KRT6CP48668 564 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 TAP2Q03519 686 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 EMX2Q04743 252 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 NAE1Q13564 534 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 SHBQ15464 509 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 C6orf136Q5SQH8 315 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 CAPN13Q6MZZ7 669 aaPredicted RBP11.52□□□□□ -0.57
GGA3-217ENST00000583667 CCDC81Q6ZN84 652 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 CFAP61Q8NHU2 1237 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 SAP25Q8TEE9 199 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 BIRC7Q96CA5 298 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 OR2M4Q96R27 311 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 ORAI3Q9BRQ5 295 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 MENTQ9BUN1 341 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 TRIT1Q9H3H1 467 aaKnown RBP11.52□□□□□ -0.57
GGA3-217ENST00000583667 C6orf106Q9H6K1 298 aaPredicted RBP11.52□□□□□ -0.57
GGA3-217ENST00000583667 MVB12BQ9H7P6 319 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 FGF22Q9HCT0 170 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 FZD3Q9NPG1 666 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 SDR39U1Q9NRG7 319 aaPredicted RBP11.52□□□□□ -0.57
GGA3-217ENST00000583667 ASIC5Q9NY37 505 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 SNX6Q9UNH7 406 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 ASF1AQ9Y294 204 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.52□□□□□ -0.57
GGA3-217ENST00000583667 RNF11Q9Y3C5 154 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 KCNE2Q9Y6J6 123 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 LRBAP50851 2863 aa11.52□□□□□ -0.57
GGA3-217ENST00000583667 A0A1W2PPC4 97 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 B2RBV5 119 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 H0YIV9 168 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 MANBAO00462 879 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 GSC2O15499 205 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 PRAMEF4O60810 478 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 LINC00032P0C843 101 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 COX4I1P13073 169 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 IDO1P14902 403 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ACPPP15309 386 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 NQO1P15559 274 aaKnown RBP11.51□□□□□ -0.57
GGA3-217ENST00000583667 NPPBP16860 134 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 GPX3P22352 226 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 NDUFS1P28331 727 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 CPOXP36551 454 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 BDKRB1P46663 353 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 LSSP48449 732 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 CLDN2P57739 230 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ERVK-8P63133 956 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 GABREP78334 506 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 MAPRE2Q15555 327 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 DNAL1Q4LDG9 190 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 PRAMEF9Q5VWM5 478 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 TMEM198Q66K66 360 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 LCTLQ6UWM7 567 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 CHST15Q7LFX5 561 aaPredicted RBP11.51□□□□□ -0.57
GGA3-217ENST00000583667 IQCHQ86VS3 1027 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 DDIASQ8IXT1 998 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 SNX31Q8N9S9 440 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ZFPM2Q8WW38 1151 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 TUBGCP3Q96CW5 907 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 PPP3R2Q96LZ3 170 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 CDK15Q96Q40 435 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 RAB3IPQ96QF0 476 aaPredicted RBP11.51□□□□□ -0.57
GGA3-217ENST00000583667 OR4K3Q96R72 315 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 TBC1D10AQ9BXI6 508 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 BRINP2Q9C0B6 783 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 PCBD2Q9H0N5 130 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ATG10Q9H0Y0 220 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ASCL3Q9NQ33 180 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 FIS1Q9Y3D6 152 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 GPR45Q9Y5Y3 372 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 HEBP2Q9Y5Z4 205 aa11.51□□□□□ -0.57
GGA3-217ENST00000583667 ATP6AP2A0A1C7CYW4 349 aa11.5□□□□□ -0.57
GGA3-217ENST00000583667 PSMD12O00232 456 aaPredicted RBP11.5□□□□□ -0.57
GGA3-217ENST00000583667 CLGNO14967 610 aa11.5□□□□□ -0.57
GGA3-217ENST00000583667 LSM1O15116 133 aaKnown RBP11.5□□□□□ -0.57
GGA3-217ENST00000583667 RGS14O43566 566 aa11.5□□□□□ -0.57
GGA3-217ENST00000583667 ATP6AP2O75787 350 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms