RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 WDR37Q9Y2I8 494 aa4.92□□□□□ -1.62
SMARCE1-219ENST00000583294 ARID2Q68CP9 1835 aa4.92□□□□□ -1.62
SMARCE1-219ENST00000583294 IGSF1Q8N6C5 1336 aa4.92□□□□□ -1.62
SMARCE1-219ENST00000583294 A4D1N5 150 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SLC7A4O43246 635 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 ZG16O60844 167 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SEC24AO95486 1093 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SLC2A2P11168 524 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 DUTP33316 252 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 FOLH1Q04609 750 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 YWHAHQ04917 246 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 IL10RBQ08334 325 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 TMEM187Q14656 261 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 ZNF74Q16587 644 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 TWISTNBQ3B726 338 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 TMEM30BQ3MIR4 351 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 OR4C11Q6IEV9 310 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 CASC4Q6P4E1 433 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 FUT10Q6P4F1 479 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SLC25A47Q6Q0C1 308 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 OTOAQ7RTW8 1153 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 PHLDB2Q86SQ0 1253 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 RCOR2Q8IZ40 523 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 DCLK2Q8N568 766 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 OR5AP2Q8NGF4 316 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SLC26A7Q8TE54 656 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 SMAP2Q8WU79 429 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 AZIN2Q96A70 460 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 BTBD9Q96Q07 612 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 CDCA3Q99618 268 aaPredicted RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 LPAR4Q99677 370 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 FUCA2Q9BTY2 467 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 PITPNM3Q9BZ71 974 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 WDR13Q9H1Z4 485 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 RAVER2Q9HCJ3 691 aaKnown RBP4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 MAN2C1Q9NTJ4 1040 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 ATAD3AQ9NVI7 634 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 RNF186Q9NXI6 227 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 ANGPTL3Q9Y5C1 460 aa4.91□□□□□ -1.62
SMARCE1-219ENST00000583294 TRBV4-1A0A0J9YWV2 114 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 YDJCA8MPS7 323 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 C2CD4DB7Z1M9 353 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 TMEM150CB9EJG8 249 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 PAK4O96013 591 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 PRKAR1AP10644 381 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF26P17031 533 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 CEBPBP17676 345 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 CTNNA1P35221 906 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 LEPRP48357 1165 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 HYAL1Q12794 435 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ITGA9Q13797 1035 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 TRIM29Q14134 588 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 E2F5Q15329 346 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 SPOUT1Q5T280 376 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 OTUD3Q5T2D3 398 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ADAMTSL4-AS1Q5T5F5 129 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 GFI1BQ5VTD9 330 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 PRSS55Q6UWB4 352 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 CREBRFQ8IUR6 639 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 C4orf19Q8IY42 314 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 GBP7Q8N8V2 638 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF248Q8NDW4 579 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 OR4C15Q8NGM1 316 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 NCOA7Q8NI08 942 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 GDAP1Q8TB36 358 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 MRGPRDQ8TDS7 321 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 SGF29Q96ES7 293 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF486Q96H40 463 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 RBM41Q96IZ5 413 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 NKX3-1Q99801 234 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 GPATCH1Q9BRR8 931 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 PI4K2AQ9BTU6 479 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 MLPHQ9BV36 600 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 FGF22Q9HCT0 170 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 PLCXD1Q9NUJ7 323 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 C2orf42Q9NWW7 574 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 CACNG5Q9UF02 275 aa4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 ZFP37Q9Y6Q3 630 aaPredicted RBP4.9□□□□□ -1.63
SMARCE1-219ENST00000583294 MEIOCA2RUB1 952 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 H3BMM5 538 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 NR5A2O00482 541 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 KHDRBS3O75525 346 aaKnown RBP4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 MOCS2O96007 188 aaPredicted RBP4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 C9P02748 559 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 ATP12AP54707 1039 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 PAX9P55771 341 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 TMEM132DQ14C87 1099 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 CCDC158Q5M9N0 1113 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 SLC24A5Q71RS6 500 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 TUSC5Q8IXB3 177 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 LSMEM2Q8N112 164 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 ATAD1Q8NBU5 361 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 RBM4Q9BWF3 364 aaKnown RBP4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 NYXQ9GZU5 481 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 LSG1Q9H089 658 aaKnown RBP4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms