RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 EMP2P54851 167 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 RPS15AP62244 130 aaKnown RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 PRSS58Q8IYP2 241 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 PDIK1LQ8N165 341 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 EEF1AKMT1Q8WVE0 214 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 THAP11Q96EK4 314 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 C19orf60Q96EN9 201 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 MMABQ96EY8 250 aaPredicted RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 THOC3Q96J01 351 aaKnown RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 RUNDC3BQ96NL0 473 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 PRAP1Q96NZ9 151 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 LMF1Q96S06 567 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 NDNQ99608 321 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 BARD1Q99728 777 aaKnown RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 YIPF2Q9BWQ6 316 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 EPS8L2Q9H6S3 715 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 SYNPO2LQ9H987 977 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 PARVBQ9HBI1 364 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 CORO1CQ9ULV4 474 aaPredicted RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 PDE10AQ9Y233 779 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 COPG1Q9Y678 874 aaKnown RBP13.25□□□□□ -0.29
PSMD11-207ENST00000578397 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
PSMD11-207ENST00000578397 NSG1A0A0A6YYJ2 146 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 IDSB3KWA1 339 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 FOXS1O43638 330 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 AHSGP02765 367 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 FDXRP22570 491 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 CCND1P24385 295 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 IVDP26440 423 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 GABRB3P28472 473 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 GLRBP48167 497 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 TBPL1P62380 186 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 Q0VFX4 171 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 MRPL49Q13405 166 aaKnown RBP13.24□□□□□ -0.29
PSMD11-207ENST00000578397 MORF4L2Q15014 288 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 BBS9Q3SYG4 887 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 MSS51Q4VC12 460 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 PAQR3Q6TCH7 311 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 ISLR2Q6UXK2 745 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 NDUFAF7Q7L592 441 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 LAPTM4BQ86VI4 370 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 KBTBD2Q8IY47 623 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 AMER3Q8N944 861 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 SSC4DQ8WTU2 575 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 LRRC39Q96DD0 335 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 CERS2Q96G23 380 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 FAM129AQ9BZQ8 928 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 KCNF1Q9H3M0 494 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 ZNF160Q9HCG1 818 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 AGPAT4Q9NRZ5 378 aa13.24□□□□□ -0.29
PSMD11-207ENST00000578397 A0A0A6YYC8 382 aaPredicted RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 H0YIG0 161 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 I3L1I5 382 aaPredicted RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 P2RX6O15547 441 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 BANF1O75531 89 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 CBX6O95503 412 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 DDAH2O95865 285 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HEXBP07686 556 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HIST1H2AGP0C0S8 130 aaPredicted RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HIST1H2ADP20671 130 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 AVPR1BP47901 424 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 CDKN2DP55273 166 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 IL2P60568 153 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 MFAP5Q13361 173 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 NR6A1Q15406 480 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HIF1AQ16665 826 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 RBM20Q5T481 1227 aaKnown RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 TEDDM1Q5T9Z0 273 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 B3GNTL1Q67FW5 361 aaPredicted RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 AGTRAPQ6RW13 159 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 C17orf64Q86WR6 236 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 PLD3Q8IV08 490 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 IGDCC3Q8IVU1 814 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 C8orf44Q96CB5 159 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HIST1H2AHQ96KK5 128 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 HIST1H2AJQ99878 128 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 H2AFJQ9BTM1 129 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 SGPP1Q9BX95 441 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 NOVA2Q9UNW9 492 aaKnown RBP13.23□□□□□ -0.29
PSMD11-207ENST00000578397 PCM1Q15154 2024 aa13.23□□□□□ -0.29
PSMD11-207ENST00000578397 LOC102723996A0A087X1L8 192 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
PSMD11-207ENST00000578397 SEMA7AO75326 666 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 NSA2O95478 260 aaKnown RBP13.22□□□□□ -0.29
PSMD11-207ENST00000578397 SERPINA7P05543 415 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 CYC1P08574 325 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 PRR35P0CG20 571 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 COX6A1P12074 109 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 GRK3P35626 688 aa13.22□□□□□ -0.29
PSMD11-207ENST00000578397 TSFMP43897 325 aaKnown RBP13.22□□□□□ -0.29
PSMD11-207ENST00000578397 AP1S2P56377 157 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms