RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 FBXO36Q8NEA4 188 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 OR11G2Q8NGC1 345 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 ANKRD7Q92527 254 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 RERGQ96A58 199 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 PNPLA2Q96AD5 504 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 THAP11Q96EK4 314 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 ERP44Q9BS26 406 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 SARGQ9BW04 601 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 FAM129AQ9BZQ8 928 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 DRC3Q9H069 523 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 SOX17Q9H6I2 414 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 WHRNQ9P202 907 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 ZFATQ9P243 1243 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 FBXL4Q9UKA2 621 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 SNX24Q9Y343 169 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 MAP4K5Q9Y4K4 846 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 PSAT1Q9Y617 370 aa11.84□□□□□ -0.51
CSNK1D-206ENST00000577578 POLEQ07864 2286 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 SCN3AQ9NY46 2000 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 TTLL8A6PVC2 850 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 MASP2O00187 686 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ENO2P09104 434 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 HIST1H2AGP0C0S8 130 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 NPPBP16860 134 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 HIST1H2ADP20671 130 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 RPS15AP62244 130 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ETF1P62495 437 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ILF2Q12905 390 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 NAE1Q13564 534 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 PPP1R3AQ16821 1122 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 VWA2Q5GFL6 755 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ATG9BQ674R7 924 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 IGFL2Q6UWQ7 119 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 TMEM207Q6UWW9 146 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ADCK2Q7Z695 626 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 PLD3Q8IV08 490 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ANKMY2Q8IV38 441 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ABHD11Q8NFV4 315 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 OR56A3Q8NH54 315 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 MIEF2Q96C03 454 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 TM4SF19Q96DZ7 209 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 VPS50Q96JG6 964 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 HIST1H2AHQ96KK5 128 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 HIST1H2AJQ99878 128 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 H2AFJQ9BTM1 129 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 CRB3Q9BUF7 120 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 ATG10Q9H0Y0 220 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 C14orf105Q9NVL8 296 aa11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-206ENST00000577578 NAV2Q8IVL1 2488 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 H0YIG0 161 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 PCDH17O14917 1159 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 EIF3HO15372 352 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 PGGT1BP53609 377 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 SNRPNP63162 240 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 RAPSNQ13702 412 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 RBBP7Q16576 425 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 CAPN13Q6MZZ7 669 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 CYS1Q717R9 158 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 STRA8Q7Z7C7 330 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 ATCAYQ86WG3 371 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 C17orf64Q86WR6 236 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 ZBED8Q8IZ13 594 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 OR4K1Q8NGD4 311 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 FBXL8Q96CD0 374 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 OR4K3Q96R72 315 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 MESP1Q9BRJ9 268 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 HAUS8Q9BT25 410 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 TRIM54Q9BYV2 358 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 PHACTR1Q9C0D0 580 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 RHOJQ9H4E5 214 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 ABCF3Q9NUQ8 709 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 ARL15Q9NXU5 204 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 NSMCE4AQ9NXX6 385 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 GRHL1Q9NZI5 618 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 TRPC4Q9UBN4 977 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 C3orf18Q9UK00 162 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 IKZF3Q9UKT9 509 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 B3GNT3Q9Y2A9 372 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 MRPS2Q9Y399 296 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 CPAMD8Q8IZJ3 1885 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 SCN2AQ99250 2005 aa11.82□□□□□ -0.52
CSNK1D-206ENST00000577578 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-206ENST00000577578 A0A0A6YYC8 382 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms