RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TSTA3Q13630 321 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 TSTD2Q5T7W7 516 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 GARNL3Q5VVW2 1013 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 PLAG1Q6DJT9 500 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 PTRHD1Q6GMV3 140 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 AFTPHQ6ULP2 937 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 ANKRD37Q7Z713 158 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 TMEM200AQ86VY9 491 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 PAQR7Q86WK9 346 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 TGIF2LYQ8IUE0 185 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 PLD3Q8IV08 490 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 TMEM178AQ8NBL3 297 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 OR9A4Q8NGU2 314 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 GSDMBQ8TAX9 411 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 TSSK1BQ9BXA7 367 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 DRC3Q9H069 523 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 CDCP1Q9H5V8 836 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 CCM2LQ9NUG4 571 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 LRFN1Q9P244 771 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 EFR3BQ9Y2G0 817 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 PCDHA3Q9Y5H8 950 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 HCFC1P51610 2035 aa9.54□□□□□ -0.88
NPLOC4-220ENST00000576940 SCN3AQ9NY46 2000 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 ABCA2Q9BZC7 2435 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 HEATR5BQ9P2D3 2071 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 A0A1B0GTH9 108 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 SYCE3A1L190 88 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 PRMT5O14744 637 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 PSMD3O43242 534 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 VPS26AO75436 327 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 TOXO94900 526 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 TPOP07202 933 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 KLK2P20151 261 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 AVPR1BP47901 424 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 TFF3Q07654 80 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 FAM53BQ14153 422 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 TMED2Q15363 201 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 ZNF425Q6IV72 752 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 OTOAQ7RTW8 1153 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 PRSS41Q7RTY9 318 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 DMRTC2Q8IXT2 367 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 FAM98AQ8NCA5 519 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 PPFIBP2Q8ND30 876 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 OR51Q1Q8NH59 317 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 LILRB4Q8NHJ6 448 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 M1APQ8TC57 530 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 RERGQ96A58 199 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 MACROD1Q9BQ69 325 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 ZNF559Q9BR84 538 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 LIME1Q9H400 295 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 ABCF3Q9NUQ8 709 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 MARCH4Q9P2E8 410 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 TAC3Q9UHF0 121 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 PCYOX1Q9UHG3 505 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 ANAPC5Q9UJX4 755 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 RNF6Q9Y252 685 aa9.53□□□□□ -0.88
NPLOC4-220ENST00000576940 FAM221AA4D161 298 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 SUN1O94901 812 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 TJP3O95049 919 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ZNF24P17028 368 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ADRA1DP25100 572 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CTNNA1P35221 906 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 RPA3P35244 121 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PTGS2P35354 604 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PPARGP37231 505 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 RFC3P40938 356 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CCNFP41002 786 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 XCR1P46094 333 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 NR0B1P51843 470 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PRAMEP78395 509 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ACVR1Q04771 509 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PRDX1Q06830 199 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ACTN3Q08043 901 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CDH17Q12864 832 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 AKAP6Q13023 2319 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CES4AQ5XG92 561 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ICE2Q659A1 982 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 C11orf63Q6NUN7 778 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ADCK2Q7Z695 626 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 LINC00523Q86TU6 105 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CD163Q86VB7 1156 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 ZNF227Q86WZ6 799 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CCDC71Q8IV32 467 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 RPRMLQ8N4K4 120 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 OR9A1PQ8NGU1 263 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 FAM57AQ8TBR7 257 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 MAGEC3Q8TD91 643 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 SMPDL3AQ92484 453 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 FAM136AQ96C01 138 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CCDC138Q96M89 665 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 FOPNLQ96NB1 174 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PANX3Q96QZ0 392 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 PKP4Q99569 1192 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 FOXC2Q99958 501 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 P2RY12Q9H244 342 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 CXXC4Q9H2H0 198 aa9.52□□□□□ -0.89
NPLOC4-220ENST00000576940 MMP25Q9NPA2 562 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms