RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 DCAF12Q5T6F0 453 aa13□□□□□ -0.33
NDE1-209ENST00000574109 FCRL6Q6DN72 434 aa13□□□□□ -0.33
NDE1-209ENST00000574109 HIST2H2AA3Q6FI13 130 aa13□□□□□ -0.33
NDE1-209ENST00000574109 GRHL2Q6ISB3 625 aa13□□□□□ -0.33
NDE1-209ENST00000574109 TLDC1Q6P9B6 456 aa13□□□□□ -0.33
NDE1-209ENST00000574109 FRMD7Q6ZUT3 714 aa13□□□□□ -0.33
NDE1-209ENST00000574109 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
NDE1-209ENST00000574109 DNAJC22Q8N4W6 341 aa13□□□□□ -0.33
NDE1-209ENST00000574109 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
NDE1-209ENST00000574109 ATP6V1E2Q96A05 226 aa13□□□□□ -0.33
NDE1-209ENST00000574109 PPM1MQ96MI6 270 aa13□□□□□ -0.33
NDE1-209ENST00000574109 PRAP1Q96NZ9 151 aa13□□□□□ -0.33
NDE1-209ENST00000574109 OR6C1Q96RD1 312 aa13□□□□□ -0.33
NDE1-209ENST00000574109 TAAR9Q96RI9 348 aa13□□□□□ -0.33
NDE1-209ENST00000574109 ZNF382Q96SR6 550 aa13□□□□□ -0.33
NDE1-209ENST00000574109 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
NDE1-209ENST00000574109 NTMT1Q9BV86 223 aa13□□□□□ -0.33
NDE1-209ENST00000574109 IPPKQ9H8X2 491 aa13□□□□□ -0.33
NDE1-209ENST00000574109 ACTR8Q9H981 624 aa13□□□□□ -0.33
NDE1-209ENST00000574109 PISDQ9UG56 409 aa13□□□□□ -0.33
NDE1-209ENST00000574109 ADGRE2Q9UHX3 823 aa13□□□□□ -0.33
NDE1-209ENST00000574109 SERTAD3Q9UJW9 196 aa13□□□□□ -0.33
NDE1-209ENST00000574109 PILRAQ9UKJ1 303 aa13□□□□□ -0.33
NDE1-209ENST00000574109 SATB2Q9UPW6 733 aa13□□□□□ -0.33
NDE1-209ENST00000574109 WASF3Q9UPY6 502 aa13□□□□□ -0.33
NDE1-209ENST00000574109 MSRB2Q9Y3D2 182 aa13□□□□□ -0.33
NDE1-209ENST00000574109 PCDHGA7Q9Y5G6 932 aa13□□□□□ -0.33
NDE1-209ENST00000574109 AP1M2Q9Y6Q5 423 aa13□□□□□ -0.33
NDE1-209ENST00000574109 FAM149AA5PLN7 773 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 TMEM150CB9EJG8 249 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 HAT1O14929 419 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 ZSCAN9O15535 394 aaPredicted RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 NPHS1O60500 1241 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 CLDN9O95484 217 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 BPGMP07738 259 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 CREB1P16220 341 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 RBMS1P29558 406 aaKnown RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 ARL1P40616 181 aaPredicted RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 GABRA4P48169 554 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 EMP3P54852 163 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 CLDN6P56747 220 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SKP1P63208 163 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 CLCQ05315 142 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 FOXM1Q08050 763 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 GALNT1Q10472 559 aaPredicted RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 CHIT1Q13231 466 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SLBPQ14493 270 aaKnown RBP eCLIP12.99□□□□□ -0.33
NDE1-209ENST00000574109 ZIC1Q15915 447 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 RBBP7Q16576 425 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 FBXO48Q5FWF7 155 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 MANEAQ5SRI9 462 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 HHATQ5VTY9 493 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 NIPAL1Q6NVV3 410 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 TMIGD1Q6UXZ0 262 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 L3MBTL4Q8NA19 623 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 TTC29Q8NA56 475 aaPredicted RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 ESAMQ96AP7 390 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 ARL8AQ96BM9 186 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 ZNF501Q96CX3 271 aaPredicted RBP12.99□□□□□ -0.33
NDE1-209ENST00000574109 ZNF285Q96NJ3 590 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SCNM1Q9BWG6 230 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 KLHL25Q9H0H3 589 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SLC39A1Q9NY26 324 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 ASB1Q9Y576 335 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 PCDHGA11Q9Y5H2 935 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 NCOR2Q9Y618 2525 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
NDE1-209ENST00000574109 SEC16AO15027 2179 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 SDK2Q58EX2 2172 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 URADA6NGE7 173 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 H0YIV9 168 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 NVLO15381 856 aaKnown RBP12.98□□□□□ -0.33
NDE1-209ENST00000574109 CTSVO60911 334 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
NDE1-209ENST00000574109 OR2B3O76000 313 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 WFS1O76024 890 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
NDE1-209ENST00000574109 FGF3P11487 239 aaPredicted RBP12.98□□□□□ -0.33
NDE1-209ENST00000574109 FOLR1P15328 257 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 EPORP19235 508 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 GRK2P25098 689 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 SCTRP47872 440 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 ARSFP54793 590 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 NAGLUP54802 743 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 ERVPABLB-1P60509 514 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 ZNF33BQ06732 778 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 RGS1Q08116 209 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 TRAF3Q13114 568 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 PWP1Q13610 501 aa12.98□□□□□ -0.33
NDE1-209ENST00000574109 DOC2AQ14183 400 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms