RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 RGS4P49798 205 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 MRPS25P82663 173 aaKnown RBP16.56■□□□□ 0.24
SMG6-214ENST00000573827 FAM53BQ14153 422 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 UBAP2LQ14157 1087 aaKnown RBP16.56■□□□□ 0.24
SMG6-214ENST00000573827 AGTRAPQ6RW13 159 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 MCOLN3Q8TDD5 553 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 COL26A1Q96A83 441 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 TM4SF19Q96DZ7 209 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 SNF8Q96H20 258 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 CRB3Q9BUF7 120 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 TGIF2Q9GZN2 237 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 TMEM184CQ9NVA4 438 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 CORO1CQ9ULV4 474 aaPredicted RBP16.56■□□□□ 0.24
SMG6-214ENST00000573827 VWA7Q9Y334 891 aa16.56■□□□□ 0.24
SMG6-214ENST00000573827 NPPBP16860 134 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 FBLP22087 321 aaKnown RBP16.55■□□□□ 0.24
SMG6-214ENST00000573827 HRH2P25021 359 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ARL4CP56559 192 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 SBSNQ6UWP8 590 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 Q6ZS92 163 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ZC3H7AQ8IWR0 971 aaKnown RBP16.55■□□□□ 0.24
SMG6-214ENST00000573827 PRSS58Q8IYP2 241 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 OR56A3Q8NH54 315 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 MIEF2Q96C03 454 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 PDLIM5Q96HC4 596 aaKnown RBP16.55■□□□□ 0.24
SMG6-214ENST00000573827 OR4K3Q96R72 315 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 KRT12Q99456 494 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 BARD1Q99728 777 aaKnown RBP16.55■□□□□ 0.24
SMG6-214ENST00000573827 TRIM31Q9BZY9 425 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ATG10Q9H0Y0 220 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ABCF3Q9NUQ8 709 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 RNF14Q9UBS8 474 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 C3orf18Q9UK00 162 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 G3BP2Q9UN86 482 aaKnown RBP16.55■□□□□ 0.24
SMG6-214ENST00000573827 SNX24Q9Y343 169 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 CSAG2Q9Y5P2 127 aa16.55■□□□□ 0.24
SMG6-214ENST00000573827 ITPR2Q14571 2701 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 SVILO95425 2214 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 A0A0A6YYC8 382 aaPredicted RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 I3L1I5 382 aaPredicted RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 LCMT2O60294 686 aaKnown RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 WISP3O95389 354 aaPredicted RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 C1QAP02745 245 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 STATHP02808 62 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 COX6A1P12074 109 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 GNLYP22749 145 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 BCL6P41182 706 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 NAE1Q13564 534 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 RBBP7Q16576 425 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 TUBB8Q3ZCM7 444 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 THEMIS2Q5TEJ8 643 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 LCTLQ6UWM7 567 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 PRSS41Q7RTY9 318 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 CUZD1Q86UP6 607 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 ZC3HC1Q86WB0 502 aaKnown RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 ATCAYQ86WG3 371 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 MYO1HQ8N1T3 1032 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 AMER2Q8N7J2 671 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 FBXO36Q8NEA4 188 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 ABHD11Q8NFV4 315 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 PSMF1Q92530 271 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 C8orf44Q96CB5 159 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 C19orf60Q96EN9 201 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 MACROD1Q9BQ69 325 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 SARGQ9BW04 601 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 DRC3Q9H069 523 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 UTP6Q9NYH9 597 aaKnown RBP16.54■□□□□ 0.24
SMG6-214ENST00000573827 TRPC4Q9UBN4 977 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 CDC14AQ9UNH5 594 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 B3GNT3Q9Y2A9 372 aa16.54■□□□□ 0.24
SMG6-214ENST00000573827 LOC102723996A0A087X1L8 192 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 EFCAB8A8MWE9 144 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 IDSB3KWA1 339 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 TXNDC9O14530 226 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 HPP00738 406 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 ALPPP05187 535 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 ZNF37AP17032 561 aaPredicted RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 ITGA3P26006 1051 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 IL2P60568 153 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 RPS15AP62244 130 aaKnown RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 MAT1AQ00266 395 aaKnown RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 OCA2Q04671 838 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 MGAT5Q09328 741 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 PDIA2Q13087 525 aaKnown RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 FAM45BPQ6NSW5 357 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 ADCK2Q7Z695 626 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 FAM26EQ8N5C1 309 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 GPATCH11Q8N954 259 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 OR4K1Q8NGD4 311 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 GABPB2Q8TAK5 448 aaPredicted RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 FAM45AQ8TCE6 357 aa16.53■□□□□ 0.24
SMG6-214ENST00000573827 RERGQ96A58 199 aaPredicted RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 SNRNP40Q96DI7 357 aaKnown RBP16.53■□□□□ 0.24
SMG6-214ENST00000573827 THAP11Q96EK4 314 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms