RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CACNA1DQ01668 2161 aa12.77□□□□□ -0.36
CCDC40-205ENST00000571028 CRYBG3Q68DQ2 2970 aa12.77□□□□□ -0.36
CCDC40-205ENST00000571028 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 TLCD2A6NGC4 264 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 ARGFXA6NJG6 315 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 ZNF839A8K0R7 811 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 MATN2O00339 956 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 SUPT3HO75486 399 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 S100BP04271 92 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-205ENST00000571028 NUDT17P0C025 328 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 ST6GAL1P15907 406 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 IMPA1P29218 277 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 KIR2DS3Q14952 304 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 NR6A1Q15406 480 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 C18orf21Q32NC0 220 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-205ENST00000571028 KLC3Q6P597 504 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 ADAMTSL2Q86TH1 951 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 CENPLQ8N0S6 344 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-205ENST00000571028 MREGQ8N565 214 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.37
CCDC40-205ENST00000571028 MYRIPQ8NFW9 859 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 STAG3L4Q8TBR4 150 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 KIAA1191Q96A73 305 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 PYCR2Q96C36 320 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 MTBPQ96DY7 904 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 CD180Q99467 661 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 RAB33BQ9H082 229 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 ING2Q9H160 280 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 CENPHQ9H3R5 247 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 TAC3Q9UHF0 121 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 OARD1Q9Y530 152 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
CCDC40-205ENST00000571028 A0A0J9YY10 115 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 A0A1W2PPV9 198 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 E7ENX8 843 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 UBXN8O00124 270 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 HNRNPRO43390 633 aaKnown RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 KLHL2O95198 593 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ANXA5P08758 320 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 PYGBP11216 843 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 HSD17B2P37059 387 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 KCNC1P48547 511 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 RPS15P62841 145 aaKnown RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 YBX1P67809 324 aaKnown RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 SH3BP2P78314 561 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 TAP2Q03519 686 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ARHGAP19Q14CB8 494 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 UGT8Q16880 541 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 KRT71Q3SY84 523 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 PPP1R3BQ86XI6 285 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 HPS6Q86YV9 775 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ANKRD7Q92527 254 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ESAMQ96AP7 390 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 FBXL8Q96CD0 374 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 CCDC177Q9NQR7 707 aaPredicted RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 WWOXQ9NZC7 414 aa12.76□□□□□ -0.37
CCDC40-205ENST00000571028 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 NOVA2Q9UNW9 492 aaKnown RBP12.76□□□□□ -0.37
CCDC40-205ENST00000571028 ARHGAP10A1A4S6 786 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TOX3O15405 576 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 MAP3K7O43318 606 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 CDH16O75309 829 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 EBLN1P0CF75 366 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 FOLR1P15328 257 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 MAGP20916 626 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 CMPK1P30085 196 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 GRIA3P42263 894 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 MAGEA12P43365 314 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 AP1S2P56377 157 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TBPL1P62380 186 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ACAP2Q15057 778 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TGFBIQ15582 683 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 GPR19Q15760 415 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 PPP1R3AQ16821 1122 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 SLC5A12Q1EHB4 618 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
CCDC40-205ENST00000571028 CEP85LQ5SZL2 805 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 PRAMEF13Q5VWM6 474 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 CCDC91Q7Z6B0 441 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 SYVN1Q86TM6 617 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ISCA2Q86U28 154 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 FLVCR1-AS1Q8TAF5 88 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ATL1Q8WXF7 558 aa12.75□□□□□ -0.37
CCDC40-205ENST00000571028 ISL2Q96A47 359 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms