RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZUFSPQ96AP4 578 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 CAPZA3Q96KX2 299 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 QRFPRQ96P65 431 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 LPAR4Q99677 370 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 PIGQQ9BRB3 760 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 WDR83Q9BRX9 315 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF747Q9BV97 191 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 SELENOOQ9BVL4 669 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 LDAHQ9H6V9 325 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 COG4Q9H9E3 785 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 UGT1A7Q9HAW7 530 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 UGT1A10Q9HAW8 530 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 UGT1A8Q9HAW9 530 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 BPIFA1Q9NP55 256 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 TIMMDC1Q9NPL8 285 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 HAUS2Q9NVX0 235 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 TRMT1Q9NXH9 659 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 CWC15Q9P013 229 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 STOX2Q9P2F5 926 aaPredicted RBP6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 SPRR3Q9UBC9 169 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 KCNS2Q9ULS6 477 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 FAM169AQ9Y6X4 670 aa6.13□□□□□ -1.43
HERPUD1-217ENST00000569429 TRGV5A0A0B4J1U4 118 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 C2orf72A6NCS6 295 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SIGLEC16A6NMB1 481 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 C2orf81A6NN90 581 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 H3BRJ5 948 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 AURKAO14965 403 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 MATN3O15232 486 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 GPR39O43194 453 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 OR10H2O60403 315 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ERN1O75460 977 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 VENTXO95231 258 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 FKBP9O95302 570 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 MMP2P08253 660 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ANXA5P08758 320 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PIRTP0C851 137 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PNMA6AP0CW24 399 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF16P17020 682 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SYT1P21579 422 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PDHA2P29803 388 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 AKT1P31749 480 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 HMGCLP35914 325 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 MAGEA5P43359 124 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PRLHRP49683 370 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 AGFG1P52594 562 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SLC26A5P58743 744 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PTP4A2Q12974 167 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 RPA4Q13156 261 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ITGA9Q13797 1035 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 USP10Q14694 798 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SLC10A1Q14973 349 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PPP2R5EQ16537 467 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SYT16Q17RD7 645 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ACSF3Q4G176 576 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF658BQ4V348 819 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ERMARDQ5T6L9 678 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 FRMPD2BQ6IN97 320 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SHISA2Q6UWI4 295 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 KIAA0408Q6ZU52 694 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 TBC1D21Q8IYX1 336 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PSD4Q8NDX1 1056 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SEMA6DQ8NFY4 1073 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 OR2M7Q8NG81 312 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 OR5AR1Q8NGP9 310 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SLC22A18Q96BI1 424 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF653Q96CK0 615 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 HSPBAP1Q96EW2 488 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 MMABQ96EY8 250 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 WFIKKN1Q96NZ8 548 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 TRIB3Q96RU7 358 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 RHNO1Q9BSD3 238 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 CRACR2AQ9BSW2 395 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SNRNP25Q9BV90 132 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 OCEL1Q9H607 264 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 IL1RL2Q9HB29 575 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 EML4Q9HC35 981 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 ETNK2Q9NVF9 386 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 RBM22Q9NW64 420 aaKnown RBP eCLIP6.12□□□□□ -1.438e-10■■■■■ 33.4
HERPUD1-217ENST00000569429 ZFATQ9P243 1243 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 POLG2Q9UHN1 485 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 DNAJC12Q9UKB3 198 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 PCDHA3Q9Y5H8 950 aa6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-217ENST00000569429 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 IGHV4-30-2A0A087WSY4 118 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 LOC105369274A0A096LPK9 316 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 LOC102723532A0A0G2JNH3 316 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SLC35F4A4IF30 521 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 TGFBR3LH3BV60 316 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 HS3ST1O14792 307 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 FOXS1O43638 330 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 S1PR4O95977 384 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 MMEP08473 750 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 CELA3AP09093 270 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 IGHV4-31P0DP07 118 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms