RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CBSP35520 551 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MESP2Q0VG99 397 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 BNIP3Q12983 259 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 BORAQ6PGQ7 559 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 NCCRP1Q6ZVX7 275 aaPredicted RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 LRRC70Q7Z2Q7 622 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 TMPRSS11BQ86T26 416 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 AADATQ8N5Z0 425 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 SPERTQ8NA61 448 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 GALNT6Q8NCL4 622 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 C7orf57Q8NEG2 295 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 AP2M1Q96CW1 435 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 MCCC1Q96RQ3 725 aaPredicted RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 LYSMD1Q96S90 227 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ACAT2Q9BWD1 397 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 DCAF13Q9NV06 445 aaKnown RBP8.48□□□□□ -1.05
LINC00558-201ENST00000569422 VNN3Q9NY84 501 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ABCG2Q9UNQ0 655 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ERVW-1Q9UQF0 538 aa8.48□□□□□ -1.05
LINC00558-201ENST00000569422 ANTXRLA6NF34 631 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 H3BMQ9 156 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 NOL3O60936 208 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ERN1O75460 977 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 SCELO95171 688 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TFPTP0C1Z6 253 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ELFN1P0C7U0 828 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PPM1AP35813 382 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 DCTP40126 519 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 MNX1P50219 401 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 COL9A2Q14055 689 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CYP27C1Q4G0S4 372 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TCEAL5Q5H9L2 206 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 LDLRAP1Q5SW96 308 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 AGTRAPQ6RW13 159 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TRAPPC5Q8IUR0 188 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 GRAMD2AQ8IUY3 354 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ADHFE1Q8IWW8 467 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CFAP206Q8IYR0 622 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 C1orf52Q8N6N3 182 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 RASGEF1AQ8N9B8 481 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 UBTD2Q8WUN7 234 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 GAB3Q8WWW8 586 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 COG8Q96MW5 612 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CPPED1Q9BRF8 314 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 UQCC2Q9BRT2 126 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 SLC29A3Q9BZD2 475 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 KCNH6Q9H252 994 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PREBQ9HCU5 417 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 POLMQ9NP87 494 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 THG1LQ9NWX6 298 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 SIRT5Q9NXA8 310 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 VPS29Q9UBQ0 182 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 BAG5Q9UL15 447 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ERVK-11Q9UQG0 969 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 YY2O15391 372 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 NUAK1O60285 661 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PFDN1O60925 122 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 XYLBO75191 536 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 OPN1SWP03999 348 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PRPS2P11908 318 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TIMP2P16035 220 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 EPCAMP16422 314 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TNFRSF1BP20333 461 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 FSHRP23945 695 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 LSM3P62310 102 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 HPCAP84074 193 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM115Q12893 351 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 UGT8Q16880 541 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 LILRA6Q6PI73 481 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CCDC81Q6ZN84 652 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 TRMT11Q7Z4G4 463 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 METTL3Q86U44 580 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CMTM7Q96FZ5 175 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PYURFQ96I23 114 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF641Q96N77 438 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 SAMD11Q96NU1 681 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 NRTNQ99748 197 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 RC3H2Q9HBD1 1191 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 RASSF1Q9NS23 344 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 RAPGEFL1Q9UHV5 662 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 LAMP5Q9UJQ1 280 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CARD8Q9Y2G2 431 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 GOLGA4Q13439 2230 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 WASH3PC4AMC7 463 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 K7ESM1 405 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 PRSS23O95084 383 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CYP2A6P11509 494 aaPredicted RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 NDUFV2P19404 249 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 FMO3P31513 532 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 VIPR1P32241 457 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CTNNB1P35222 781 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 HSD17B2P37059 387 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 SLC6A12P48065 614 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CD47Q08722 323 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 DCTN2Q13561 401 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 INAQ16352 499 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CTU2Q2VPK5 515 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms