RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 LRCH3Q96II8 777 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PIWIL1Q96J94 861 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZSWIM3Q96MP5 696 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NECTIN4Q96NY8 510 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IKZF4Q9H2S9 585 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ADAM7Q9H2U9 754 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TOR3AQ9H497 397 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 AIG1Q9NVV5 245 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TVP23BQ9NYZ1 205 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MARK1Q9P0L2 795 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TNFRSF10DQ9UBN6 386 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FBXO10Q9UK96 956 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MRPS23Q9Y3D9 190 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FAAHO00519 579 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GNB5O14775 395 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MSI1O43347 362 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 LATS1O95835 1130 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GLUD1P00367 558 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RENP00797 406 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RETP07949 1114 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FGF4P08620 206 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DCKP27707 260 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 AQP1P29972 269 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IGFALSP35858 605 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DNASE1L1P49184 302 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CCR8P51685 355 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RCAN2Q14206 197 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RAB39AQ14964 217 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC14A2Q15849 920 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PIGGQ5H8A4 983 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 COLEC12Q5KU26 742 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 HACD4Q5VWC8 232 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM198Q66K66 360 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OGFOD2Q6N063 350 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SHQ1Q6PI26 577 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RNF44Q7L0R7 432 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GALNT7Q86SF2 657 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ANKRD13BQ86YJ7 626 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TREML1Q86YW5 311 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 UMODL1-AS1Q8N2C9 162 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SDR16C5Q8N3Y7 309 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CPA6Q8N4T0 437 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 METTL25Q8N6Q8 603 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MFSD2AQ8NA29 543 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 INO80EQ8NBZ0 244 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OR8J1Q8NGP2 316 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EXOC2Q96KP1 924 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF354BQ96LW1 612 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TPT1P8Q9HAU6 139 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ABCB9Q9NP78 766 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PTTG3PQ9NZH4 202 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDH10Q9P2E7 1040 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DEC1Q9P2X7 70 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MLXQ9UH92 298 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EVLQ9UI08 416 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IKZF2Q9UKS7 526 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHGA3Q9Y5H0 932 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TIAM2Q8IVF5 1701 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SHANK3Q9BYB0 1731 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 A0A1W2PPW3 197 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OR6C70A6NIJ9 312 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 H0Y858 1186 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 COQ9O75208 318 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PRLP01236 227 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GIMD1P0DJR0 217 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EN2P19622 333 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OR1D2P34982 312 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT2B10P36537 528 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ENTPD1P49961 510 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CTBP2P56545 445 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OGDHQ02218 1023 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NIPAL4Q0D2K0 466 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SIX1Q15475 284 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TARBP2Q15633 366 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PLEKHN1Q494U1 663 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SIRPB2Q5JXA9 342 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 C6orf136Q5SQH8 315 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NANOGP8Q6NSW7 305 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 REEP3Q6NUK4 255 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 BLOC1S3Q6QNY0 202 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FRRS1Q6ZNA5 592 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PRSS48Q7RTY5 328 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZFAND4Q86XD8 727 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SCML4Q8N228 414 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GDPD1Q8N9F7 314 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DENND6BQ8NEG7 585 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF548Q8NEK5 533 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TSEN15Q8WW01 171 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CHFRQ96EP1 664 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC2A13Q96QE2 648 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EPYCQ99645 322 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PRRX2Q99811 253 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC35A5Q9BS91 424 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CD244Q9BZW8 370 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NANOGQ9H9S0 305 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PIGVQ9NUD9 493 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 POLR3BQ9NW08 1133 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms