RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CSNK1G2P78368 415 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 PDIA2Q13087 525 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 AIMP2Q13155 320 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 SP140Q13342 867 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 NAE1Q13564 534 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 DSG2Q14126 1118 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 PRAMEF13Q5VWM6 474 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 ATG9BQ674R7 924 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 MYO1HQ8N1T3 1032 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 AMER2Q8N7J2 671 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 GPATCH11Q8N954 259 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 GABPB2Q8TAK5 448 aaPredicted RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 ANP32BQ92688 251 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 PNPLA2Q96AD5 504 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 MIEF2Q96C03 454 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 MACROD1Q9BQ69 325 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 CRB3Q9BUF7 120 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 SGPP1Q9BX95 441 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 SEMA3GQ9NS98 782 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 TMEM184CQ9NVA4 438 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 UTP6Q9NYH9 597 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 RNF14Q9UBS8 474 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 G3BP2Q9UN86 482 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 SCN2AQ99250 2005 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 KCNE1BA0A087WTH5 132 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 A0A0A6YYC8 382 aaPredicted RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 I3L1I5 382 aaPredicted RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 LCMT2O60294 686 aaKnown RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 PIAS1O75925 651 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 IL2P60568 153 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 OCA2Q04671 838 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 INPP5JQ15735 1006 aaPredicted RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 RBBP7Q16576 425 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 SYT16Q17RD7 645 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 GARNL3Q5VVW2 1013 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 PRSS41Q7RTY9 318 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 ZC3HC1Q86WB0 502 aaKnown RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 PARP9Q8IXQ6 854 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 C8orf44Q96CB5 159 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 TM4SF19Q96DZ7 209 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 MMABQ96EY8 250 aaPredicted RBP13.92□□□□□ -0.18
FANCA-220ENST00000566409 MCMBPQ9BTE3 642 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 SMYD2Q9NRG4 433 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 TRPC4Q9UBN4 977 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 C3orf18Q9UK00 162 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 CSAG2Q9Y5P2 127 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 ICE1Q9Y2F5 2266 aa13.92□□□□□ -0.18
FANCA-220ENST00000566409 FEZF1A0PJY2 475 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 CDH1P12830 882 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 ITGA3P26006 1051 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 BCL6P41182 706 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 MGAT5Q09328 741 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
FANCA-220ENST00000566409 FAM53BQ14153 422 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 UBAP2LQ14157 1087 aaKnown RBP13.91□□□□□ -0.18
FANCA-220ENST00000566409 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 LCTLQ6UWM7 567 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 SBSNQ6UWP8 590 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 PALM2Q8IXS6 379 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 SPATA4Q8NEY3 305 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 FAM45AQ8TCE6 357 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 ALKBH8Q96BT7 664 aaKnown RBP13.91□□□□□ -0.18
FANCA-220ENST00000566409 C19orf60Q96EN9 201 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 PDLIM5Q96HC4 596 aaKnown RBP13.91□□□□□ -0.18
FANCA-220ENST00000566409 OR4K3Q96R72 315 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 ERP44Q9BS26 406 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 TGIF2Q9GZN2 237 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 DRC3Q9H069 523 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 PCBD2Q9H0N5 130 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 CORO1CQ9ULV4 474 aaPredicted RBP13.91□□□□□ -0.18
FANCA-220ENST00000566409 CDC14AQ9UNH5 594 aa13.91□□□□□ -0.18
FANCA-220ENST00000566409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
FANCA-220ENST00000566409 POLEQ07864 2286 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 SVILO95425 2214 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 CENPEQ02224 2701 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 IDSB3KWA1 339 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 TXNDC9O14530 226 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 RAD51CO43502 376 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ALPPP05187 535 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.18
FANCA-220ENST00000566409 GNLYP22749 145 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 HRH2P25021 359 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 TAS2R39P59534 338 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 RPS15AP62244 130 aaKnown RBP13.9□□□□□ -0.18
FANCA-220ENST00000566409 MAT1AQ00266 395 aaKnown RBP13.9□□□□□ -0.18
FANCA-220ENST00000566409 MEF2AQ02078 507 aaPredicted RBP13.9□□□□□ -0.18
FANCA-220ENST00000566409 ZNF460Q14592 562 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 PPP1R3AQ16821 1122 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 IGFL2Q6UWQ7 119 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 Q6ZS92 163 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 STRA8Q7Z7C7 330 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ATCAYQ86WG3 371 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms