RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CAMKVQ8NCB2 501 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 OR2Y1Q8NGV0 311 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 CYTH2Q99418 400 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 SGPP1Q9BX95 441 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 DERL2Q9GZP9 239 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 ING2Q9H160 280 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
CNOT1-206ENST00000564557 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
CNOT1-206ENST00000564557 NXT1Q9UKK6 140 aaKnown RBP13.04□□□□□ -0.32
CNOT1-206ENST00000564557 RUVBL1Q9Y265 456 aaKnown RBP13.04□□□□□ -0.32
CNOT1-206ENST00000564557 OARD1Q9Y530 152 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
CNOT1-206ENST00000564557 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 CDH1P12830 882 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 NPPBP16860 134 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 CRABP2P29373 138 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 AVPR1BP47901 424 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 CSNK1G2P78368 415 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 CDKL1Q00532 357 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 TSNQ15631 228 aaKnown RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 HKDC1Q2TB90 917 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 PRTGQ2VWP7 1150 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 LACTB2Q53H82 288 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 FAM69BQ5VUD6 431 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MRPL14Q6P1L8 145 aaKnown RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 SBSNQ6UWP8 590 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MED25Q71SY5 747 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 GPSM1Q86YR5 675 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 APLFQ8IW19 511 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 IFT20Q8IY31 132 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 TMEM102Q8N9M5 508 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 ANKRD49Q8WVL7 239 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 SLC5A11Q8WWX8 675 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MIEF2Q96C03 454 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MMABQ96EY8 250 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 MCMBPQ9BTE3 642 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 UNKQ9C0B0 810 aaKnown RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 WDR54Q9H977 334 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 ENAMQ9NRM1 1142 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 ZNF282Q9UDV7 671 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-206ENST00000564557 KCNE2Q9Y6J6 123 aa13.03□□□□□ -0.32
CNOT1-206ENST00000564557 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.32
CNOT1-206ENST00000564557 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.32
CNOT1-206ENST00000564557 FEZF1A0PJY2 475 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 NCF1BA6NI72 391 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 NCF1CA8MVU1 366 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 KLF7O75840 302 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 FAM155BO75949 473 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 C1QL1O75973 258 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SERPIND1P05546 499 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SLC35G6P0C7Q6 338 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 NCF1P14598 390 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 GCGRP47871 477 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 CHAF1BQ13112 559 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 PRICKLE2Q7Z3G6 844 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 THOC6Q86W42 341 aaKnown RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 TCAIMQ8N3R3 496 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SPATA6LQ8N4H0 392 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 DRC3Q9H069 523 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SOX17Q9H6I2 414 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 CNOT10Q9H9A5 744 aaKnown RBP13.02□□□□□ -0.33
CNOT1-206ENST00000564557 WWOXQ9NZC7 414 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 NINJ2Q9NZG7 142 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 CD274Q9NZQ7 290 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 TRPC4Q9UBN4 977 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 RNF112Q9ULX5 631 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 SLC22A14Q9Y267 594 aa13.02□□□□□ -0.33
CNOT1-206ENST00000564557 KCNE1BA0A087WTH5 132 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 OR1F1O43749 312 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 KLHL41O60662 606 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 WDR47O94967 919 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 ACSL3O95573 720 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 ONECUT2O95948 504 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 INHBAP08476 426 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 FAM53BQ14153 422 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.331e-11■□□□□ 10
CNOT1-206ENST00000564557 TGFBIQ15582 683 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 RBBP7Q16576 425 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 NKG7Q16617 165 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 PPP1R3AQ16821 1122 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 MROH9Q5TGP6 573 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
CNOT1-206ENST00000564557 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms