RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FGF22Q9HCT0 170 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 MOSPD1Q9UJG1 213 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 POU2F3Q9UKI9 436 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 ST14Q9Y5Y6 855 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 STK25O00506 426 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PIP5K1BO14986 540 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ZNF217O75362 1048 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ACP5P13686 325 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
GDE1-203ENST00000564172 CD6P30203 668 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 AKT2P31751 481 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PFN3P60673 137 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 MILR1Q7Z6M3 343 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PDZD3Q86UT5 571 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 RLN3Q8WXF3 142 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 HPS1Q92902 700 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 UHRF1Q96T88 793 aaPredicted RBP17.11■□□□□ 0.33
GDE1-203ENST00000564172 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 KLHL25Q9H0H3 589 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 STOX2Q9P2F5 926 aaPredicted RBP17.11■□□□□ 0.33
GDE1-203ENST00000564172 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 SLC22A14Q9Y267 594 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PCDHGA3Q9Y5H0 932 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ATP6AP2A0A1C7CYW4 349 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 PRR5-ARHGAP8B1AHC4 643 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 KATNA1O75449 491 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ATP6AP2O75787 350 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 WDR47O94967 919 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 SLC16A8O95907 504 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 EPORP19235 508 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 CCR5P51681 352 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 C19orf57Q0VDD7 668 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 NDUFAF5Q5TEU4 345 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 TMEM198Q66K66 360 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 KIAA0895LQ68EN5 471 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 GCNT7Q6ZNI0 430 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 GALNT13Q8IUC8 556 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 GALNT4Q8N4A0 578 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ZNF420Q8TAQ5 688 aaPredicted RBP17.11■□□□□ 0.33
GDE1-203ENST00000564172 RASSF5Q8WWW0 418 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 TIMM29Q9BSF4 260 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
GDE1-203ENST00000564172 TAGLN3Q9UI15 199 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 HS3ST3A1Q9Y663 406 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
GDE1-203ENST00000564172 ZFC3H1O60293 1989 aaKnown RBP17.1■□□□□ 0.33
GDE1-203ENST00000564172 TRIM64BA6NI03 449 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 DCXO43602 365 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 TSPAN9O75954 239 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 BMP10O95393 424 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 CAPN1P07384 714 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 IL32P24001 234 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 IMPA1P29218 277 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 NFATC4Q14934 902 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 CCDC58Q4VC31 144 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 TPRG1LQ5T0D9 272 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 UNC5DQ6UXZ4 953 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 CADM3Q8N126 398 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 METTL6Q8TCB7 284 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 TFGQ92734 400 aaPredicted RBP17.1■□□□□ 0.33
GDE1-203ENST00000564172 BIRC7Q96CA5 298 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 CHRDQ9H2X0 955 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 ASF1AQ9Y294 204 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 BTRCQ9Y297 605 aa17.1■□□□□ 0.33
GDE1-203ENST00000564172 PRSS38A1L453 326 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 POLR2CP19387 275 aaPredicted RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 RPL10P27635 214 aaKnown RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 P2RX3P56373 397 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 B2MP61769 119 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 ENPP7Q6UWV6 458 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 LARP4Q71RC2 724 aaKnown RBP eCLIP17.09■□□□□ 0.33
GDE1-203ENST00000564172 EFL1Q7Z2Z2 1120 aaKnown RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 SPEM1Q8N4L4 309 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 FAM160A2Q8N612 972 aaPredicted RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 PYDC1Q8WXC3 89 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 MRGBPQ9NV56 204 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 INTS7Q9NVH2 962 aaKnown RBP17.09■□□□□ 0.33
GDE1-203ENST00000564172 KCNN3Q9UGI6 736 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 PLEKHM1Q9Y4G2 1056 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 GPSM3Q9Y4H4 160 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 FAM172BPA6NC97 362 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 B8ZZF3 427 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 KCNJ13O60928 360 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 APBB3O95704 486 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 LINC00032P0C843 101 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 EBLN1P0CF75 366 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 AOC1P19801 751 aa17.09■□□□□ 0.33
GDE1-203ENST00000564172 KELP23276 732 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms