RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KIAA0100Q14667 2235 aaKnown RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 TRIOBPQ9H2D6 2365 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZNF236Q9UL36 1845 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 CNTNAP2Q9UHC6 1331 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 A0A0G2JNG1 304 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 A0A1W2PS18 150 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ASPDHA6ND91 283 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 TMEM221A6NGB7 291 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 RSPH10B2B2RC85 870 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 LOC730098B7Z3J9 87 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 M0R296 226 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 HAS3O00219 553 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 CLDN4O14493 209 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 RNF113AO15541 343 aaKnown RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 LIPFP07098 398 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 RSPH10BP0C881 870 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 CKMT2P17540 419 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 GM2AP17900 193 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ACHEP22303 614 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 HOXC8P31273 242 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 SLC6A6P31641 620 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 GP5P40197 560 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ARCN1P48444 511 aaKnown RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 ASCL1P50553 236 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 PDX1P52945 283 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 RBP5P82980 135 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ROR1Q01973 937 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 POU3F1Q03052 451 aaPredicted RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 RBPJQ06330 500 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 SCN1BQ07699 218 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 BFSP1Q12934 665 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 MFAP5Q13361 173 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 GPM6BQ13491 265 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 KEAP1Q14145 624 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 KIR2DS5Q14953 304 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 GPNMBQ14956 572 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 STXBP2Q15833 593 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 HYAL4Q2M3T9 481 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 EPC2Q52LR7 807 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 HECTD3Q5T447 861 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ARMC3Q5W041 872 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 TMEM184AQ6ZMB5 413 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 KCTD8Q6ZWB6 473 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 SERINC5Q86VE9 423 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 COMMD2Q86X83 199 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 ZNF611Q8N823 705 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 NKAIN3Q8N8D7 197 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 L3MBTL4Q8NA19 623 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 KBTBD3Q8NAB2 608 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 SLC4A11Q8NBS3 891 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 DEPDC1BQ8WUY9 529 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 DAZLQ92904 295 aaKnown RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 ATP6V1E2Q96A05 226 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 MOB3AQ96BX8 217 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 CITED2Q99967 270 aaPredicted RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 C16orf70Q9BSU1 422 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 SLA2Q9H6Q3 261 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 GAREM1Q9H706 876 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 TRPC7Q9HCX4 862 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 MBNL1Q9NR56 388 aaKnown RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 OLFML3Q9NRN5 406 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 RALYQ9UKM9 306 aaKnown RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 COL6A3P12111 3177 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 CENPFP49454 3210 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 TRIP12Q14669 1992 aaPredicted RBP3.51□□□□□ -1.85
HERC1-215ENST00000561436 OTOFQ9HC10 1997 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 LOC285556D6RIA3 1793 aa3.51□□□□□ -1.85
HERC1-215ENST00000561436 TAF1P21675 1872 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 HYKKA2RU49 373 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SRRM3A6NNA2 597 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 HEPACAM2A8MVW5 462 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 PRR32B1ATL7 298 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ZNF587BE7ETH6 402 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 MBTPS2O43462 519 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 PRKAB2O43741 272 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SYNGR3O43761 229 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 LDB3O75112 727 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SLCO2B1O94956 709 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 MMP1P03956 469 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 RAB40ALP0C0E4 278 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 DANCRP0C864 163 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 TOP1P11387 765 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 FGF3P11487 239 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 IL9P15248 144 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 HOXB8P17481 243 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 CTNNA1P35221 906 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 NBL1P41271 181 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 TDO2P48775 406 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 MMP15P51511 669 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 CAPZA1P52907 286 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 EEF1A2Q05639 463 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 ALX1Q15699 326 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ASIC2Q16515 512 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 VWC2Q2TAL6 325 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 TCEAL5Q5H9L2 206 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SIRPB2Q5JXA9 342 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 C9orf57Q5W0N0 161 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 FAM198BQ6UWH4 519 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 PPP1R21Q6ZMI0 780 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms