RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 PRUNE1Q86TP1 453 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 SLC13A5Q86YT5 568 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 LPGAT1Q92604 370 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 LURAP1Q96LR2 239 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 TCF12Q99081 682 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 KIFC1Q9BW19 673 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 FAM114A2Q9NRY5 505 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 TAC3Q9UHF0 121 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 H0YIG0 161 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 KIF5CO60282 957 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 SLC19A2O60779 497 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 VAPBO95292 243 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 CATP04040 527 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 COX6B1P14854 86 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 CHRM3P20309 590 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 FMO4P31512 558 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 RPL22P35268 128 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 EFNA3P52797 238 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 CRADDP78560 199 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF33BQ06732 778 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 NDUFA9Q16795 377 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 SYT16Q17RD7 645 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 SEL1L2Q5TEA6 688 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 H3F3CQ6NXT2 135 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 C4orf22Q6V702 233 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 NEK10Q6ZWH5 1172 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 OTUD6BQ8N6M0 293 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 FBXO15Q8NCQ5 510 aaPredicted RBP11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 THAP3Q8WTV1 239 aaPredicted RBP11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 C1orf54Q8WWF1 131 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 PKP4Q99569 1192 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 BFARQ9NZS9 450 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 PCYOX1Q9UHG3 505 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 DRG1Q9Y295 367 aaKnown RBP11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 CAPN6Q9Y6Q1 641 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
CARMIL3-204ENST00000561354 APCP25054 2843 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 E7ENX8 843 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 P2RX6O15547 441 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 MLYCDO95822 493 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 SLC16A8O95907 504 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ZSCAN5DPP0CG00 497 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 OGNP20774 298 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 AVPR1BP47901 424 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 SMSP52788 366 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 MAT1AQ00266 395 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 TAP2Q03519 686 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 SNX1Q13596 522 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 TSTA3Q13630 321 aaPredicted RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 KRTCAP3Q53RY4 240 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ACSBG2Q5FVE4 666 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF766Q5HY98 468 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 PLAG1Q6DJT9 500 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 CPEB2Q7Z5Q1 589 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 MTERF4Q7Z6M4 381 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 AMER2Q8N7J2 671 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF480Q8WV37 535 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 MFSD3Q96ES6 412 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF354BQ96LW1 612 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 CYTH2Q99418 400 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 EBNA1BP2Q99848 306 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 TRIM8Q9BZR9 551 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 TSGA10Q9BZW7 698 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 VN1R1Q9GZP7 353 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 GALPQ9UBC7 116 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 C19orf25Q9UFG5 118 aaPredicted RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 SH3BGRL2Q9UJC5 107 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
CARMIL3-204ENST00000561354 PKDREJQ9NTG1 2253 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 KCNE1BA0A087WTH5 132 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 A8MUI8 341 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SMAPO00193 183 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SEC24DO94855 1032 aaPredicted RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 NSA2O95478 260 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 SNRPB2P08579 225 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 ESRRAP11474 423 aaPredicted RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 CASQ1P31415 396 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 BASP1P80723 227 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 CDK16Q00536 496 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 PMP22Q01453 160 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 PTK6Q13882 451 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 C3AR1Q16581 482 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 CCNG2Q16589 344 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 BTBD16Q32M84 506 aa11.18□□□□□ -0.62
CARMIL3-204ENST00000561354 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms