RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	ZNF670	Q9BS34	389 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	MLPH	Q9BV36	600 aa	Predicted RBP	6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	FAM83D	Q9H4H8	585 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	OCIAD1	Q9NX40	245 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	KCTD5	Q9NXV2	234 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	SEPT10	Q9P0V9	454 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	UVRAG	Q9P2Y5	699 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	TBC1D29	Q9UFV1	150 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	SHOC2	Q9UQ13	582 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	KCNK6	Q9Y257	313 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	MYO18B	Q8IUG5	2567 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	HECTD1	Q9ULT8	2610 aa		6.92	□□□□□ -1.3
MARK3-223	ENST00000561071	ANKRD66	B4E2M5	251 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071		F5H423	210 aa	Predicted RBP	6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	TRIAP1	O43715	76 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	ACP5	P13686	325 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	ZNF30	P17039	623 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	ZNF8	P17098	575 aa	Predicted RBP	6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	LIMK2	P53671	638 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	WNT3	P56703	355 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	PPID	Q08752	370 aa	Known RBP	6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	NR1D2	Q14995	579 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071		Q6YL49	198 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	LIX1L	Q8IVB5	337 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	LNX2	Q8N448	690 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	SFRP1	Q8N474	314 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	PLD5	Q8N7P1	536 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	GPR26	Q8NDV2	337 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	OR8K1	Q8NGG5	319 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	HTR3C	Q8WXA8	447 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	TMEM159	Q96B96	161 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	HDAC11	Q96DB2	347 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	IQCD	Q96DY2	449 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	SGF29	Q96ES7	293 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	WBP1	Q96G27	269 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	MOGAT1	Q96PD6	335 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	AMBRA1	Q9C0C7	1298 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	GOLPH3	Q9H4A6	298 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	PRDM8	Q9NQV8	689 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	SLC39A1	Q9NY26	324 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	ATXN10	Q9UBB4	475 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	SLC23A2	Q9UGH3	650 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	TFR2	Q9UP52	801 aa		6.91	□□□□□ -1.3
MARK3-223	ENST00000561071	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	6.91	□□□□□ -1.3	4e-8	■■□□□ 11.8
MARK3-223	ENST00000561071	GRID2IP	A4D2P6	1211 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MBD3L3	A6NE82	208 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	EFCAB7	A8K855	629 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071		J3QKU1	62 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	APOL1	O14791	398 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	GRID2	O43424	1007 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MTX2	O75431	263 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	PMPCB	O75439	489 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	RASSF9	O75901	435 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MT-CYB	P00156	380 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	FSHB	P01225	129 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	THRA	P10827	490 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	KRT4	P19013	534 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	CA4	P22748	312 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	CSTF2	P33240	577 aa	Known RBP eCLIP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MAN1A1	P33908	653 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	RPL26	P61254	145 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	IFI35	P80217	286 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	KLF10	Q13118	480 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	CLCA4	Q14CN2	919 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	LONRF1	Q17RB8	773 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	PLA1A	Q53H76	456 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	HENMT1	Q5T8I9	393 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	SLC9A4	Q6AI14	798 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TMEM71	Q6P5X7	295 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	IYD	Q6PHW0	289 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MFSD7	Q6UXD7	560 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	GAS2L3	Q86XJ1	694 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	RFX6	Q8HWS3	928 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	VSTM4	Q8IW00	320 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	FAM109A	Q8N4B1	249 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	BEND2	Q8NDZ0	799 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TOR1AIP2	Q8NFQ8	470 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	OR4D9	Q8NGE8	314 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	NCSTN	Q92542	709 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	SPSB4	Q96A44	273 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	IMP4	Q96G21	291 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	ZNF830	Q96NB3	372 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TRIB3	Q96RU7	358 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	LYSMD1	Q96S90	227 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	OSBPL9	Q96SU4	736 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	AIFM2	Q9BRQ8	373 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	SPATA16	Q9BXB7	569 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TBC1D10A	Q9BXI6	508 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	MAK16	Q9BXY0	300 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	ADGRE3	Q9BY15	652 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	ACTRT3	Q9BYD9	372 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	TRIM4	Q9C037	500 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	UNK	Q9C0B0	810 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	OR2AG1	Q9H205	316 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	APMAP	Q9HDC9	416 aa		6.9	□□□□□ -1.3
MARK3-223	ENST00000561071	BPIFA1	Q9NP55	256 aa		6.9	□□□□□ -1.3

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