RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 AIF1LQ9BQI0 150 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ACBD3Q9H3P7 528 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 IPPKQ9H8X2 491 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 GEMIN8Q9NWZ8 242 aaKnown RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 SLC17A7Q9P2U7 560 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 KLHL3Q9UH77 587 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ADGRE2Q9UHX3 823 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ZFP69BQ9UJL9 534 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ZNF490Q9ULM2 529 aaPredicted RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 SATB2Q9UPW6 733 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 SH2B3Q9UQQ2 575 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 SPTBN4Q9H254 2564 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 FAM149AA5PLN7 773 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 C9orf172C9J069 976 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 E7EQ34 232 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 OR7A17O14581 309 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 CLGNO14967 610 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 HCRTR1O43613 425 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 LCMT2O60294 686 aaKnown RBP11.59□□□□□ -0.55
IRF9-211ENST00000560852 CCNT2O60583 730 aaKnown RBP11.59□□□□□ -0.55
IRF9-211ENST00000560852 PRAMEF10O60809 474 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
IRF9-211ENST00000560852 FGF4P08620 206 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 HBQ1P09105 142 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 JMJD7P0C870 316 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 CDH1P12830 882 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 EEF1DP29692 281 aaKnown RBP11.59□□□□□ -0.55
IRF9-211ENST00000560852 ETV5P41161 510 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SEPHS1P49903 392 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 ARFIP1P53367 373 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 PKNOX1P55347 436 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 ITGA1P56199 1179 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SH3BP2P78314 561 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 CLCQ05315 142 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 FOXC1Q12948 553 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 FAM53BQ14153 422 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 DOC2AQ14183 400 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 PAGE2BQ5JRK9 111 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SNAP47Q5SQN1 464 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 DCAF12Q5T6F0 453 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TMEM164Q5U3C3 297 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 GRHL2Q6ISB3 625 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 GOLGA7Q7Z5G4 137 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 VN1R4Q7Z5H5 301 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 PPP1R3BQ86XI6 285 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 DTX1Q86Y01 620 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TBC1D19Q8N5T2 526 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TEX9Q8N6V9 391 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 NT5CQ8TCD5 201 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 GATA6Q92908 595 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 NXPE2Q96DL1 559 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 MVB12AQ96EY5 273 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 CNDP1Q96KN2 507 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 FAM111AQ96PZ2 611 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 TMEM237Q96Q45 408 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 OR6C1Q96RD1 312 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 ZNF382Q96SR6 550 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 GSTO2Q9H4Y5 243 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 CLK4Q9HAZ1 481 aaKnown RBP11.59□□□□□ -0.55
IRF9-211ENST00000560852 FANCEQ9HB96 536 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SLC39A1Q9NY26 324 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 RARRES3Q9UL19 164 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
IRF9-211ENST00000560852 H0YGG7 62 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 FOXE1O00358 373 aaPredicted RBP11.58□□□□□ -0.56
IRF9-211ENST00000560852 HAT1O14929 419 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 ZSCAN9O15535 394 aaPredicted RBP11.58□□□□□ -0.56
IRF9-211ENST00000560852 NPHS1O60500 1241 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 SPAG7O75391 227 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 CLEC3AO75596 197 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 CLDN9O95484 217 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 OTCP00480 354 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 SMIM10L1P0DMW3 83 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 CD22P20273 847 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 ALDH3A1P30838 453 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 SERPINB4P48594 390 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 ARSFP54793 590 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 NAGLUP54802 743 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 WDR4P57081 412 aaKnown RBP11.58□□□□□ -0.56
IRF9-211ENST00000560852 ARF3P61204 181 aaPredicted RBP11.58□□□□□ -0.56
IRF9-211ENST00000560852 IRF8Q02556 426 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 LCP2Q13094 533 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 TRAF3Q13114 568 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 CHIT1Q13231 466 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 TUBB3Q13509 450 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 FAM214AQ32MH5 1076 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 ADPRMQ3LIE5 342 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 RHBDD2Q6NTF9 364 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 TMIGD1Q6UXZ0 262 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 FRMD7Q6ZUT3 714 aa11.58□□□□□ -0.56
IRF9-211ENST00000560852 MED25Q71SY5 747 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms