RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 OR2L3Q8NG85 312 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 NINJ1Q92982 152 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CDKN2AIPNLQ96HQ2 116 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 TUBB6Q9BUF5 446 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 UCK2Q9BZX2 261 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 LIME1Q9H400 295 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 KCNN3Q9UGI6 736 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 TEKT2Q9UIF3 430 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 RUVBL1Q9Y265 456 aaKnown RBP9.37□□□□□ -0.91
TPM1-225ENST00000560679 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 FOXO6A8MYZ6 492 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 H0YGG7 62 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 CES2O00748 559 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 FOXS1O43638 330 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 GPC4O75487 556 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 FKBP9O95302 570 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MLYCDO95822 493 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 FTCDO95954 541 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 OR56A5P0C7T3 313 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 C8orf89P0DMQ9 161 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MYBL2P10244 700 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ERVK-10P10266 1014 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ICAM2P13598 275 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ZNF24P17028 368 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 COMTP21964 271 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 PSMA3P25788 255 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 EEF1DP29692 281 aaKnown RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 PAFAH1B1P43034 410 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 BDKRB1P46663 353 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ARF3P61204 181 aaPredicted RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 VSNL1P62760 191 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 AP2B1P63010 937 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 PPP2R2AP63151 447 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 FOLH1Q04609 750 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 HSPA14Q0VDF9 509 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 FASTKQ14296 549 aaKnown RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 POU6F1Q14863 301 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 CEBPEQ15744 281 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 HKDC1Q2TB90 917 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 BTBD16Q32M84 506 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ANKRD20A2Q5SQ80 823 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 CCDC181Q5TID7 509 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ANKRD20A1Q5TYW2 823 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 ANKRD20A3Q5VUR7 823 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 PLAG1Q6DJT9 500 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 UNC5DQ6UXZ4 953 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 CCDC50Q8IVM0 306 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 LRRC57Q8N9N7 239 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 OR2A1Q8NGT9 310 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 LILRB4Q8NHJ6 448 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 CFAP61Q8NHU2 1237 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 HDAC10Q969S8 669 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MVB12AQ96EY5 273 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MMABQ96EY8 250 aaPredicted RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 ZFYVE21Q9BQ24 234 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 YIPF2Q9BWQ6 316 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 VN1R1Q9GZP7 353 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MKKSQ9NPJ1 570 aaPredicted RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 ZNF358Q9NW07 568 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 MKL2Q9ULH7 1088 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 RNF6Q9Y252 685 aa9.36□□□□□ -0.91
TPM1-225ENST00000560679 AAR2Q9Y312 384 aaKnown RBP9.36□□□□□ -0.91
TPM1-225ENST00000560679 A0A0A6YYC8 382 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 IGKV1-8A0A0C4DH67 115 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 IQCF5A8MTL0 148 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 I3L1I5 382 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 PRRG2O14669 202 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 P2RX6O15547 441 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 PRPF4O43172 522 aaKnown RBP eCLIP9.35□□□□□ -0.91
TPM1-225ENST00000560679 PSTPIP1O43586 416 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 HOXD4P09016 255 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 TPH1P17752 444 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 CHRNB4P30926 498 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 EMP3P54852 163 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 MAT1AQ00266 395 aaKnown RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 LTBQ06643 244 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 C2orf54Q08AI8 447 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 RPS6KA1Q15418 735 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 ZNF468Q5VIY5 522 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 KCTD11Q693B1 232 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 FBXO42Q6P3S6 717 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 CEP128Q6ZU80 1094 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 BBS12Q6ZW61 710 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 Q71RC1 249 aaPredicted RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 SYCE1Q8N0S2 351 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 CPSF7Q8N684 471 aaKnown RBP9.35□□□□□ -0.91
TPM1-225ENST00000560679 CSNK1A1LQ8N752 337 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 TMEM178AQ8NBL3 297 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 SPATA4Q8NEY3 305 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 HMGCLL1Q8TB92 370 aa9.35□□□□□ -0.91
TPM1-225ENST00000560679 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms