RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ITGA3P26006 1051 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 GRIA1P42261 906 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SESN2P58004 480 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 NR6A1Q15406 480 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 EIF2S3LQ2VIR3 472 aaKnown RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 PLEKHN1Q494U1 663 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 STEAP4Q687X5 459 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 TTC19Q6DKK2 380 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 PTRHD1Q6GMV3 140 aaKnown RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 FIGLAQ6QHK4 219 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 LMNTD1Q8N9Z9 388 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 FOPNLQ96NB1 174 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 IL17FQ96PD4 163 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
SMAD3-214ENST00000560402 P2RY12Q9H244 342 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 CCDC134Q9H6E4 229 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SLC6A20Q9NP91 592 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 AGPAT4Q9NRZ5 378 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SEMA3GQ9NS98 782 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 ASF1BQ9NVP2 202 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
SMAD3-214ENST00000560402 IQCF5A8MTL0 148 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 H3BMM5 538 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 PFDN6O15212 129 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 CD3EAPO15446 510 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 PRICKLE3O43900 615 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 AVILO75366 819 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 CBX6O95503 412 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 MGAT1P26572 445 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 FRG1Q14331 258 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 SF1Q15637 639 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 NKG7Q16617 165 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 RNF187Q5TA31 235 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 AGAP7PQ5VUJ5 663 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 B3GNTL1Q67FW5 361 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 FCRL6Q6DN72 434 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 PRMT9Q6P2P2 845 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 IGFL2Q6UWQ7 119 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 COX15Q7KZN9 410 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 RNF44Q7L0R7 432 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 FAM20CQ8IXL6 584 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 INPP5DQ92835 1189 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 MRRFQ96E11 262 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 AGAP4Q96P64 663 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 BARD1Q99728 777 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 EPS8L2Q9H6S3 715 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 TREX1Q9NSU2 369 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 NSMCE4AQ9NXX6 385 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 SLC5A6Q9Y289 635 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 HS3ST3B1Q9Y662 390 aa12.97□□□□□ -0.33
SMAD3-214ENST00000560402 COPG1Q9Y678 874 aaKnown RBP12.97□□□□□ -0.33
SMAD3-214ENST00000560402 ANKUB1A6NFN9 424 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 WIPF3A6NGB9 483 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 SOCS6O14544 535 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 TM9SF1O15321 606 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 NDUFS3O75489 264 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 C1orf105O95561 183 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 LDLRP01130 860 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 RNF224P0DH78 156 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 GRIA3P42263 894 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 TSFMP43897 325 aaKnown RBP12.96□□□□□ -0.33
SMAD3-214ENST00000560402 MGAT5Q09328 741 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 RBBP7Q16576 425 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 CRB2Q5IJ48 1285 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 HHATQ5VTY9 493 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 CUZD1Q86UP6 607 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 IGDCC3Q8IVU1 814 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 CISD2Q8N5K1 135 aaKnown RBP12.96□□□□□ -0.33
SMAD3-214ENST00000560402 ST6GALNAC3Q8NDV1 305 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 DCAKDQ8WVC6 231 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-214ENST00000560402 C19orf60Q96EN9 201 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 C5orf34Q96MH7 638 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 WDR83Q9BRX9 315 aaKnown RBP12.96□□□□□ -0.33
SMAD3-214ENST00000560402 LHPPQ9H008 270 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 MARCH4Q9P2E8 410 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-214ENST00000560402 KLHL20Q9Y2M5 609 aa12.96□□□□□ -0.33
SMAD3-214ENST00000560402 NOTCH2Q04721 2471 aa12.96□□□□□ -0.34
SMAD3-214ENST00000560402 HEATR5BQ9P2D3 2071 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 POLEQ07864 2286 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 FAM159BA6NKW6 160 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 VSTM2BA6NLU5 285 aa12.95□□□□□ -0.34
SMAD3-214ENST00000560402 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms