RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 DBF4BQ8NFT6 615 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPG11-210ENST00000558319 ABCD2Q9UBJ2 740 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 KCNIP3Q9Y2W7 256 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PCDHB1Q9Y5F3 818 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 OR6C75A6NL08 312 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 E2F3O00716 465 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ITGA10O75578 1167 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 SOX14O95416 240 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 AP2A1O95782 977 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 MAGEA8P43361 318 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 RPS14P62263 151 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 ARSKQ6UWY0 536 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ABHD15Q6UXT9 468 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 GALNT10Q86SR1 603 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 LGI4Q8N135 537 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ADAD1Q96M93 576 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 WASH3PC4AMC7 463 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 STT3AP46977 705 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 APLP1P51693 650 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 TLE2Q04725 743 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 PIM3Q86V86 326 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 HEPHQ9BQS7 1158 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 DPCDQ9BVM2 203 aaPredicted RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 NEMP2A6NFY4 417 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 CYB5AP00167 134 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 APOC3P02656 99 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 KLK1P06870 262 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 HTR2BP41595 481 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 GPM6BQ13491 265 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 CARD17Q5XLA6 110 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 NUS1Q96E22 293 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ENAMQ9NRM1 1142 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 FARSBQ9NSD9 589 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 RABL2BQ9UNT1 228 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 NWD1Q149M9 1564 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ALPPL2P10696 532 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 RPS2P15880 293 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 CD47Q08722 323 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 HNRNPA0Q13151 305 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 PDGFRLQ15198 375 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 SLC25A25Q6KCM7 469 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 JAGN1Q8N5M9 183 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 NLGN4YQ8NFZ3 816 aaPredicted RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 MFSD8Q8NHS3 518 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 SMURF1Q9HCE7 757 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 HCN2Q9UL51 889 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 CASP7P55210 303 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 NFE2L1Q14494 772 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 MOGQ16653 247 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ASCC1Q8N9N2 400 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 TMEM246Q9BRR3 403 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 EIF5A2Q9GZV4 153 aaKnown RBP13.6□□□□□ -0.23
SPG11-210ENST00000558319 RGCCQ9H4X1 137 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 SH2B3Q9UQQ2 575 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 NOX1Q9Y5S8 564 aa13.6□□□□□ -0.23
SPG11-210ENST00000558319 ALPPP05187 535 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 NR4A2P43354 598 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 INHBEP58166 350 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 RAB15P59190 212 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 HMGCS1Q01581 520 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 ZNF557Q8N988 423 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 PROKR2Q8NFJ6 384 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 OR52B2Q96RD2 323 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 C14orf105Q9NVL8 296 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PAQR5Q9NXK6 330 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 TMED5Q9Y3A6 229 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 CLCA3PQ9Y6N3 262 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 E7EQ34 232 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 MMP20O60882 483 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 C4BPAP04003 597 aaKnown RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 SNRPD2P62316 118 aaKnown RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 LPAL2Q16609 132 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PARP15Q460N3 678 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 CEP97Q8IW35 865 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 YIPF7Q8N8F6 280 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 RHCGQ9UBD6 479 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 NUAK1O60285 661 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 NRIP1P48552 1158 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 MEF2AQ02078 507 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 ZNF404Q494X3 552 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 GNG8Q9UK08 70 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 KCNK6Q9Y257 313 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms