RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MEOX1P50221 254 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 TFF3Q07654 80 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 PMPCAQ10713 525 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 FAM53BQ14153 422 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 GRB7Q14451 532 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 TMED2Q15363 201 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 LINC01559Q495D7 138 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 ANKRD20A2Q5SQ80 823 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MFSD4BQ5TF39 518 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 ANKRD20A1Q5TYW2 823 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 ANKRD20A3Q5VUR7 823 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 DENND5AQ6IQ26 1287 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 Q71RC1 249 aaPredicted RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 RNF44Q7L0R7 432 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CD163Q86VB7 1156 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CRLF3Q8IUI8 442 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CHERPQ8IWX8 916 aaKnown RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 RHOT2Q8IXI1 618 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 PIANPQ8IYJ0 282 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 RCOR2Q8IZ40 523 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 LGI4Q8N135 537 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CSNK1A1LQ8N752 337 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 AMER3Q8N944 861 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 OR2L3Q8NG85 312 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MAGEC3Q8TD91 643 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 ZNF592Q92610 1267 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 RERGQ96A58 199 aaPredicted RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 TMEM125Q96AQ2 219 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MBD6Q96DN6 1003 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 RMND5BQ96G75 393 aaPredicted RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 MRFAP1L1Q96HT8 127 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 C10orf90Q96M02 699 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 FOPNLQ96NB1 174 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 QKIQ96PU8 341 aaKnown RBP eCLIP4.89□□□□□ -1.63
SPG11-208ENST00000558155 ALPK1Q96QP1 1244 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MIPEPQ99797 713 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 TBL1YQ9BQ87 522 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MENTQ9BUN1 341 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CARD6Q9BX69 1037 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 HES7Q9BYE0 225 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 TP63Q9H3D4 680 aaPredicted RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 CDCP1Q9H5V8 836 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 MMP25Q9NPA2 562 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CIDEBQ9UHD4 219 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 GNPTGQ9UJJ9 305 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 CAPN11Q9UMQ6 739 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 RUVBL1Q9Y265 456 aaKnown RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 PLEKHA6Q9Y2H5 1048 aa4.89□□□□□ -1.63
SPG11-208ENST00000558155 PHF3Q92576 2039 aaKnown RBP4.89□□□□□ -1.63
SPG11-208ENST00000558155 MPDZO75970 2070 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 HEATR5BQ9P2D3 2071 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 ACANP16112 2415 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CSMD2Q7Z408 3487 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 AKAP6Q13023 2319 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 A0A0A6YYC8 382 aaPredicted RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 OR2A25A4D2G3 310 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 H0YIG0 161 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 I3L1I5 382 aaPredicted RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 NDC80O14777 642 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 TFECO14948 347 aaPredicted RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 KPNA5O15131 536 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 PSMD3O43242 534 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 FOXS1O43638 330 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 SPOPO43791 374 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 NME2P1O60361 137 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CDC40O60508 579 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPG11-208ENST00000558155 SLC25A12O75746 678 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 ZNF189O75820 626 aaPredicted RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 NEURL1O76050 574 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 C1orf105O95561 183 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 PTMAP06454 111 aaKnown RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 INHBBP09529 407 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 TPH1P17752 444 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 TFEBP19484 476 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 COMTP21964 271 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 NME2P22392 152 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 MSNP26038 577 aaKnown RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 PSMB4P28070 264 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CCR7P32248 378 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CCNFP41002 786 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 KIR2DL3P43628 341 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 ZFP36L2P47974 494 aaKnown RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 RELAQ04206 551 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 PTK6Q13882 451 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 SPARCL1Q14515 664 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 SLC18A3Q16572 532 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 SYT16Q17RD7 645 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 MINDY4Q4G0A6 757 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 RNFT1Q5M7Z0 435 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CCDC181Q5TID7 509 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 ARHGAP11AQ6P4F7 1023 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 DARS2Q6PI48 645 aaKnown RBP4.88□□□□□ -1.63
SPG11-208ENST00000558155 ARSKQ6UWY0 536 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 CLEC9AQ6UXN8 241 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 FGD2Q7Z6J4 655 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 ANKRD37Q7Z713 158 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 RETREG3Q86VR2 466 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 PAQR7Q86WK9 346 aa4.88□□□□□ -1.63
SPG11-208ENST00000558155 RPS19BP1Q86WX3 136 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms